HHsearch alignment for GI: 254781215 and conserved domain: PRK07003
>PRK07003 DNA polymerase III subunits gamma and tau; Validated.
Probab=96.39 E-value=0.071 Score=30.43 Aligned_cols=146 Identities=15% Similarity=0.127 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999998740565554210124650257659789999999999980899669998085899999999999999985
Q gi|254781215|r 55 QLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLSL 134 (511)
Q Consensus 55 Q~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~~ 134 (511)
T Consensus 21 Q~~v~~~l~nal~~~rl-~ha----ylf~G~rGvGKTt~aRi~Ak~lnC~~~~~~~pcg--~C~~C-----~~i~----~ 84 (816)
T PRK07003 21 QEHVVRALTHALDGGRL-HHA----YLFTGTRGVGKTTLSRIFAKALNCETGVTSQPCG--VCRAC-----REID----E 84 (816)
T ss_pred CHHHHHHHHHHHHCCCC-CCE----EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCC--CCHHH-----HHHH----C
T ss_conf 49999999999970986-314----7511789888889999999986789999989787--75557-----8775----5
Q ss_pred CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHHHHH
Q ss_conf 50001344432222223334443211123578616985303575561002120267614999711102997889888888
Q gi|254781215|r 135 LPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLGILGF 214 (511)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i~~~ 214 (511)
T Consensus 85 -----------------g~~~d~iEiDaAS~~~--vd~~r~l~~-~-~~y~p~~~r~-KvyiiDEvHmls~~afnalLKt 142 (816)
T PRK07003 85 -----------------GRFVDYVEMDAASNRG--VDEMAALLE-R-AVYAPVDARF-KVYMIDEVHMLTNHAFNAMLKT 142 (816)
T ss_pred -----------------CCCCCEEEEECCCCCC--HHHHHHHHH-H-CCCCCCCCCE-EEEEEECHHHCCHHHHHHHHHH
T ss_conf -----------------8877547863554357--689999998-6-2247866744-7999841543399999999984
Q ss_pred HCCCCCCEEE-EEECCCCCCCCHHH
Q ss_conf 5079981389-98238998765567
Q gi|254781215|r 215 LTERNANRFW-IMTSNPRRLSGKFY 238 (511)
Q Consensus 215 Lt~~g~~~~~-i~~~nP~~~~g~fy 238 (511)
T Consensus 143 lEepP~hv~FilaTTd~~k~p~til 167 (816)
T PRK07003 143 LEEPPPHVKFILATTDPQKIPVTVL 167 (816)
T ss_pred HCCCCCCEEEEEECCCHHHCCHHHH
T ss_conf 0379866489995588011528898