HHsearch alignment for GI: 254781215 and conserved domain: PRK07471
>PRK07471 DNA polymerase III subunit delta'; Validated.
Probab=96.24 E-value=0.086 Score=29.89 Aligned_cols=166 Identities=13% Similarity=0.116 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHH-HHH--HHHHHHHHHH
Q ss_conf 9999999999874056555421012465025765978999999999998089966999808589-999--9999999999
Q gi|254781215|r 55 QLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSET-QLK--TTLWAEVSKW 131 (511)
Q Consensus 55 Q~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~-Q~~--~ilw~Ei~k~ 131 (511)
T Consensus 22 qe~~~~~L~~a~~~grl~H-----A~Lf~Gp~GiGK~tlA~~~A~~ll~~~~~~~~~~~~~~~~l~~~~~~p~~r~i--- 93 (363)
T PRK07471 22 HAAAEAALLDAYRSGRLHH-----AWLIGGPQGIGKATLAYRMARFLLATPPPGGDAVFPPPASLAVDPDHPVARRI--- 93 (363)
T ss_pred HHHHHHHHHHHHHCCCCCC-----EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCHHHHH---
T ss_conf 1999999999998599764-----58767999818899999999998579997777767870531258777289999---
Q ss_pred HHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHH
Q ss_conf 98550001344432222223334443211123578616985303575561002120267614999711102997889888
Q gi|254781215|r 132 LSLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLGI 211 (511)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i 211 (511)
T Consensus 94 -~~~~hpdl~~i------~r~~d~k~~~~~~~I~Vd~iR~l~~~------~~~~p~~g~~k-V~IId~ad~mn~~aaNAL 159 (363)
T PRK07471 94 -AAGAHGGLLTL------ERSWNEKGKRLRTVITVDEVRETIGF------FGLTAAEGGWR-VVIVDTADEMNANAANAL 159 (363)
T ss_pred -HCCCCCCEEEE------ECCCCCCCCCCCCCCCHHHHHHHHHH------HCCCCCCCCCE-EEEEECHHHHCHHHHHHH
T ss_conf -52699984667------62001133321244539999999999------72485248966-999868787388999999
Q ss_pred HHHHCCCCCCEEEEEE-CCCCCCCCHHHHHHH
Q ss_conf 8885079981389982-389987655676530
Q gi|254781215|r 212 LGFLTERNANRFWIMT-SNPRRLSGKFYEIFN 242 (511)
Q Consensus 212 ~~~Lt~~g~~~~~i~~-~nP~~~~g~fy~~~~ 242 (511)
T Consensus 160 LK~LEEPP~~t~fiLit~~~~~llpTI~SRCq 191 (363)
T PRK07471 160 LKVLEEPPARSLLLLVSHAPARLLPTIRSRCR 191 (363)
T ss_pred HHHHCCCCCCEEEEEEECCHHHCHHHHHHHCC
T ss_conf 99721589883899863997777799997352