HHsearch alignment for GI: 254781215 and conserved domain: PRK07993

>PRK07993 DNA polymerase III subunit delta'; Validated.
Probab=95.82  E-value=0.13  Score=28.68  Aligned_cols=153  Identities=16%  Similarity=0.110  Sum_probs=77.8

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999874056555421012465025765978999999999998089966999808589999999999999998
Q gi|254781215|r   54 WQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLS  133 (511)
Q Consensus        54 WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~  133 (511)
T Consensus         6 Wl~~~~~~l~~~~~~~rl~H-----A~L~~G~~G~Gk~~la~~~a~~llC~~~~~~~~Cg~C~~C~l--~-------~~~   71 (334)
T PRK07993          6 WLRPDYEKLVGSYQAGRGHH-----ALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQL--M-------QAG   71 (334)
T ss_pred             CCHHHHHHHHHHHHCCCCCE-----EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH--H-------HCC
T ss_conf             87899999999998598104-----675479999889999999999981899999999999978999--8-------668


Q ss_pred             HCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHHHH
Q ss_conf             55000134443222222333444321112357861698530357556100212026761499971110299788988888
Q gi|254781215|r  134 LLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLGILG  213 (511)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i~~  213 (511)
T Consensus        72 ~HPD~~~i~pe~~---~~~I~IdqI---------------R~l~~--~~~~~~~~g~~k-V~iI~~Ae~mn~~AaNaLLK  130 (334)
T PRK07993         72 THPDYYTLTPEKG---KSSLGVDAV---------------REVTE--KLYEHARLGGAK-VVWLPDAALLTDAAANALLK  130 (334)
T ss_pred             CCCCEEEECCCCC---CCCCCHHHH---------------HHHHH--HHHHCCCCCCCE-EEEECCHHHHCHHHHHHHHH
T ss_conf             9998477534223---455999999---------------99999--984366569947-99976677759999999998


Q ss_pred             HHCCCCCCEEEEEE-CCCCCCCCHHHHHH
Q ss_conf             85079981389982-38998765567653
Q gi|254781215|r  214 FLTERNANRFWIMT-SNPRRLSGKFYEIF  241 (511)
Q Consensus       214 ~Lt~~g~~~~~i~~-~nP~~~~g~fy~~~  241 (511)
T Consensus       131 tLEEPp~~t~~iL~t~~~~~lLpTI~SRC  159 (334)
T PRK07993        131 TLEEPPEKTWFFLACREPARLLATLRSRC  159 (334)
T ss_pred             HHCCCCCCEEEEEECCCHHHCCCHHHHHC
T ss_conf             61279988499986698565723887523