HHsearch alignment for GI: 254781215 and conserved domain: PRK07993
>PRK07993 DNA polymerase III subunit delta'; Validated.
Probab=95.82 E-value=0.13 Score=28.68 Aligned_cols=153 Identities=16% Similarity=0.110 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999874056555421012465025765978999999999998089966999808589999999999999998
Q gi|254781215|r 54 WQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLS 133 (511)
Q Consensus 54 WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~ 133 (511)
T Consensus 6 Wl~~~~~~l~~~~~~~rl~H-----A~L~~G~~G~Gk~~la~~~a~~llC~~~~~~~~Cg~C~~C~l--~-------~~~ 71 (334)
T PRK07993 6 WLRPDYEKLVGSYQAGRGHH-----ALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQL--M-------QAG 71 (334)
T ss_pred CCHHHHHHHHHHHHCCCCCE-----EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH--H-------HCC
T ss_conf 87899999999998598104-----675479999889999999999981899999999999978999--8-------668
Q ss_pred HCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHHHH
Q ss_conf 55000134443222222333444321112357861698530357556100212026761499971110299788988888
Q gi|254781215|r 134 LLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLGILG 213 (511)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i~~ 213 (511)
T Consensus 72 ~HPD~~~i~pe~~---~~~I~IdqI---------------R~l~~--~~~~~~~~g~~k-V~iI~~Ae~mn~~AaNaLLK 130 (334)
T PRK07993 72 THPDYYTLTPEKG---KSSLGVDAV---------------REVTE--KLYEHARLGGAK-VVWLPDAALLTDAAANALLK 130 (334)
T ss_pred CCCCEEEECCCCC---CCCCCHHHH---------------HHHHH--HHHHCCCCCCCE-EEEECCHHHHCHHHHHHHHH
T ss_conf 9998477534223---455999999---------------99999--984366569947-99976677759999999998
Q ss_pred HHCCCCCCEEEEEE-CCCCCCCCHHHHHH
Q ss_conf 85079981389982-38998765567653
Q gi|254781215|r 214 FLTERNANRFWIMT-SNPRRLSGKFYEIF 241 (511)
Q Consensus 214 ~Lt~~g~~~~~i~~-~nP~~~~g~fy~~~ 241 (511)
T Consensus 131 tLEEPp~~t~~iL~t~~~~~lLpTI~SRC 159 (334)
T PRK07993 131 TLEEPPEKTWFFLACREPARLLATLRSRC 159 (334)
T ss_pred HHCCCCCCEEEEEECCCHHHCCCHHHHHC
T ss_conf 61279988499986698565723887523