HHsearch alignment for GI: 254781215 and conserved domain: PRK07994
>PRK07994 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.05 E-value=0.01 Score=35.70 Aligned_cols=149 Identities=15% Similarity=0.125 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999998740565554210124650257659789999999999980899669998085899999999999999985
Q gi|254781215|r 55 QLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLSL 134 (511)
Q Consensus 55 Q~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~~ 134 (511)
T Consensus 21 Q~~v~~~l~na~~~~r~-~h----aylf~G~rG~GKtt~ari~ak~lnc~~~~~~~pcg~--c~~c-----~~i~----~ 84 (643)
T PRK07994 21 QEHVLTALANGLSLGRI-HH----AYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGV--CDNC-----REIE----Q 84 (643)
T ss_pred CHHHHHHHHHHHHHCCC-CC----EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC--CHHH-----HHHH----C
T ss_conf 79999999999982986-63----487458998888899999999967999999997876--7768-----9886----5
Q ss_pred CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHHHHH
Q ss_conf 50001344432222223334443211123578616985303575561002120267614999711102997889888888
Q gi|254781215|r 135 LPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLGILGF 214 (511)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i~~~ 214 (511)
T Consensus 85 -----------------g~~~d~~eidaas~~~--vd~~rel~-~~-~~y~p~~~r~-kvyiidEvhmls~~afnalLKt 142 (643)
T PRK07994 85 -----------------GRFVDLIEIDAASRTK--VEDTRDLL-DN-VQYAPARGRF-KVYLIDEVHMLSRHSFNALLKT 142 (643)
T ss_pred -----------------CCCCCEEEEECCCCCC--HHHHHHHH-HH-CCCCCCCCCE-EEEEEECHHHCCHHHHHHHHHH
T ss_conf -----------------8988758863677788--89999999-84-4668877853-6999722101589999999986
Q ss_pred HCCCCCCEE-EEEECCCCCCCCHHHHHH
Q ss_conf 507998138-998238998765567653
Q gi|254781215|r 215 LTERNANRF-WIMTSNPRRLSGKFYEIF 241 (511)
Q Consensus 215 Lt~~g~~~~-~i~~~nP~~~~g~fy~~~ 241 (511)
T Consensus 143 lEePp~hv~filaTT~~~k~p~TilSRC 170 (643)
T PRK07994 143 LEEPPAHVKFLLATTDPQKLPVTILSRC 170 (643)
T ss_pred HCCCCHHCEEEEECCCHHHCCHHHHHHH
T ss_conf 2378610089986077454847899777