HHsearch alignment for GI: 254781215 and conserved domain: PRK08058

>PRK08058 DNA polymerase III subunit delta'; Validated.
Probab=96.57  E-value=0.055  Score=31.10  Aligned_cols=154  Identities=14%  Similarity=0.152  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCC-------------------CEEEEEEC
Q ss_conf             99999999998740565554210124650257659789999999999980899-------------------66999808
Q gi|254781215|r   55 QLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPG-------------------ISVICLAN  115 (511)
Q Consensus        55 Q~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~-------------------~kv~vtAp  115 (511)
T Consensus        11 Q~~i~~~L~~~i~~~rl~H-----A~Lf~Gp~G~GK~~~A~~~A~~LlC~~~~~~~~Cg~C~~C~~~~~~~HPD~~~i~p   85 (329)
T PRK08058         11 QPIVVKMLQNSIAKNRLAH-----AYLFEGAKGTGKKATALWLAKSLFCLERNGVEPCGTCTNCKRIESGNHPDVHLVAP   85 (329)
T ss_pred             HHHHHHHHHHHHHCCCCCC-----EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECC
T ss_conf             8999999999998599661-----56557899988999999999997399999999887888999987699997677456


Q ss_pred             CHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEE
Q ss_conf             58999999999999999855000134443222222333444321112357861698530357556100212026761499
Q gi|254781215|r  116 SETQLKTTLWAEVSKWLSLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAI  195 (511)
Q Consensus       116 t~~Q~~~ilw~Ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lv  195 (511)
T Consensus        86 ~~~~i~---idqiR~L~~~~-----------------------------------------------~~~p~~g~~K-V~  114 (329)
T PRK08058         86 DGQSIK---KDQIRYLKEEF-----------------------------------------------SKSGVESNKK-VY  114 (329)
T ss_pred             CCCCCC---HHHHHHHHHHH-----------------------------------------------CCCCCCCCCE-EE
T ss_conf             614077---99999999996-----------------------------------------------4387578867-99


Q ss_pred             EECCHHCCCHHHHHHHHHHHCCCCCCEEEE-EECCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCC
Q ss_conf             971110299788988888850799813899-8238998765567653035247417984043367789778999997518
Q gi|254781215|r  196 INDEASGTPDVINLGILGFLTERNANRFWI-MTSNPRRLSGKFYEIFNKPLDDWKRFQIDTRTVEGIDPSFHEGIIARYG  274 (511)
Q Consensus       196 I~DEAsgI~d~i~e~i~~~Lt~~g~~~~~i-~~~nP~~~~g~fy~~~~~~~~~w~~~~i~~~~~p~~~~~~ie~~~~~~g  274 (511)
T Consensus       115 II~~Ae~m~~~AaNALLKtLEEPp~~t~fIL~t~~~~~lLpTI~SRC-------q~i~f-----~~~~~~~i~~~L~~~~  182 (329)
T PRK08058        115 IIEHADKMTASAANSLLKFLEEPSGDTTAILLTENKHQILPTILSRC-------QVVEF-----RPLPPESLIQRLQEEG  182 (329)
T ss_pred             EEECHHHHCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCC-------EEEEC-----CCCCHHHHHHHHHHCC
T ss_conf             97347762999999999986468978679987299666436886314-------25658-----8999999999999879


Q ss_pred             CC
Q ss_conf             98
Q gi|254781215|r  275 LD  276 (511)
Q Consensus       275 ed  276 (511)
T Consensus       183 i~  184 (329)
T PRK08058        183 IS  184 (329)
T ss_pred             CC
T ss_conf             99