HHsearch alignment for GI: 254781215 and conserved domain: PRK08074
>PRK08074 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.
Probab=96.04 E-value=0.11 Score=29.30 Aligned_cols=76 Identities=22% Similarity=0.239 Sum_probs=48.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Q ss_conf 65557845899999999999874056555421012465025765978999999999998089966999808589999999
Q gi|254781215|r 45 LEGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTL 124 (511)
Q Consensus 45 ~~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~il 124 (511)
T Consensus 254 ~~~ye-~R~~Q~~ma~~V~~al~~~~--------~l~iEApTGtGKTlaYLlPai~~A~~~-~~~vvIST~T~~LQ~QL~ 323 (932)
T PRK08074 254 MPGYE-KREGQQEMMKEVYTALRDSR--------HALIEAGTGTGKTLAYLLPAAYFAKKK-EEPVIISTYTVQLQQQLL 323 (932)
T ss_pred CCCCC-CCHHHHHHHHHHHHHHHCCC--------CEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHH
T ss_conf 77887-58789999999999985388--------479986888871368799999999975-990999916288999999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254781215|r 125 WAEVSK 130 (511)
Q Consensus 125 w~Ei~k 130 (511)
T Consensus 324 ~kdlp~ 329 (932)
T PRK08074 324 EKDIPL 329 (932)
T ss_pred HHHHHH
T ss_conf 868999