HHsearch alignment for GI: 254781215 and conserved domain: PRK08770

>PRK08770 DNA polymerase III subunits gamma and tau; Validated.
Probab=94.08  E-value=0.41  Score=25.63  Aligned_cols=149  Identities=15%  Similarity=0.160  Sum_probs=76.7

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999998740565554210124650257659789999999999980899669998085899999999999999985
Q gi|254781215|r   55 QLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLSL  134 (511)
Q Consensus        55 Q~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~~  134 (511)
T Consensus        21 q~~~~~~l~~~~~~~~~-~~a----~lf~g~rg~gkt~~ar~~a~~lnc~~~~~~~pc~~--c~~c-----~~i~----~   84 (663)
T PRK08770         21 QEHVVRALSNALDSGRV-HHA----FLFTGTRGVGKTTIARIFAKSLNCETGTSADPCGQ--CPAC-----LDID----A   84 (663)
T ss_pred             CHHHHHHHHHHHHCCCC-CEE----EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC--CHHH-----HHHH----C
T ss_conf             59999999999970997-404----76227998888899999999867899999997877--8778-----9885----4


Q ss_pred             CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHHHHH
Q ss_conf             50001344432222223334443211123578616985303575561002120267614999711102997889888888
Q gi|254781215|r  135 LPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLGILGF  214 (511)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i~~~  214 (511)
T Consensus        85 -----------------~~~~d~~e~daas~~~--v~~~r~~~-~~-~~~~p~~~~~-kvy~idevhmls~~~fna~lkt  142 (663)
T PRK08770         85 -----------------GRYIDLLEIDAASNTG--VDDVREVI-EN-AQYMPSRGKF-KVYLIDEVHMLSKAAFNALLKT  142 (663)
T ss_pred             -----------------CCCCCEEEEECCCCCC--HHHHHHHH-HH-CCCCCCCCCE-EEEEEECHHHCCHHHHHHHHHH
T ss_conf             -----------------8988658864676588--89999999-84-4358877743-6999700433289999999874


Q ss_pred             HCCCCCCE-EEEEECCCCCCCCHHHHHH
Q ss_conf             50799813-8998238998765567653
Q gi|254781215|r  215 LTERNANR-FWIMTSNPRRLSGKFYEIF  241 (511)
Q Consensus       215 Lt~~g~~~-~~i~~~nP~~~~g~fy~~~  241 (511)
T Consensus       143 leepp~~v~f~~att~~~k~p~t~~src  170 (663)
T PRK08770        143 LEEPPEHVKFLLATTDPQKLPVTVLSRC  170 (663)
T ss_pred             HCCCCCCEEEEEECCCHHHCCHHHHHHH
T ss_conf             0278644289985487333748999888