HHsearch alignment for GI: 254781215 and conserved domain: PRK08770
>PRK08770 DNA polymerase III subunits gamma and tau; Validated.
Probab=94.08 E-value=0.41 Score=25.63 Aligned_cols=149 Identities=15% Similarity=0.160 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999998740565554210124650257659789999999999980899669998085899999999999999985
Q gi|254781215|r 55 QLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLSL 134 (511)
Q Consensus 55 Q~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~~ 134 (511)
T Consensus 21 q~~~~~~l~~~~~~~~~-~~a----~lf~g~rg~gkt~~ar~~a~~lnc~~~~~~~pc~~--c~~c-----~~i~----~ 84 (663)
T PRK08770 21 QEHVVRALSNALDSGRV-HHA----FLFTGTRGVGKTTIARIFAKSLNCETGTSADPCGQ--CPAC-----LDID----A 84 (663)
T ss_pred CHHHHHHHHHHHHCCCC-CEE----EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC--CHHH-----HHHH----C
T ss_conf 59999999999970997-404----76227998888899999999867899999997877--8778-----9885----4
Q ss_pred CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHHHHH
Q ss_conf 50001344432222223334443211123578616985303575561002120267614999711102997889888888
Q gi|254781215|r 135 LPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLGILGF 214 (511)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i~~~ 214 (511)
T Consensus 85 -----------------~~~~d~~e~daas~~~--v~~~r~~~-~~-~~~~p~~~~~-kvy~idevhmls~~~fna~lkt 142 (663)
T PRK08770 85 -----------------GRYIDLLEIDAASNTG--VDDVREVI-EN-AQYMPSRGKF-KVYLIDEVHMLSKAAFNALLKT 142 (663)
T ss_pred -----------------CCCCCEEEEECCCCCC--HHHHHHHH-HH-CCCCCCCCCE-EEEEEECHHHCCHHHHHHHHHH
T ss_conf -----------------8988658864676588--89999999-84-4358877743-6999700433289999999874
Q ss_pred HCCCCCCE-EEEEECCCCCCCCHHHHHH
Q ss_conf 50799813-8998238998765567653
Q gi|254781215|r 215 LTERNANR-FWIMTSNPRRLSGKFYEIF 241 (511)
Q Consensus 215 Lt~~g~~~-~~i~~~nP~~~~g~fy~~~ 241 (511)
T Consensus 143 leepp~~v~f~~att~~~k~p~t~~src 170 (663)
T PRK08770 143 LEEPPEHVKFLLATTDPQKLPVTVLSRC 170 (663)
T ss_pred HCCCCCCEEEEEECCCHHHCCHHHHHHH
T ss_conf 0278644289985487333748999888