HHsearch alignment for GI: 254781215 and conserved domain: PRK09401

>PRK09401 reverse gyrase; Reviewed.
Probab=97.06  E-value=0.011  Score=35.60  Aligned_cols=93  Identities=22%  Similarity=0.307  Sum_probs=62.4

Q ss_pred             HHHHHHHHCHHHHHHHHHHH---HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCC
Q ss_conf             88999870706665288667---764214557775655578458999999999998740565554210124650257659
Q gi|254781215|r   13 QKLFDLMWSDEIKLSFSNFV---LHFFPWGEKGTPLEGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIG   89 (511)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~---~~~~~w~~~~~~~~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~G   89 (511)
T Consensus        52 ~~~~~~~~~~~~~~~f~~fF~~~~G~~~w~~----------Qr~WakR~~~g----------------~SFaiiAPTG~G  105 (1176)
T PRK09401         52 KEYEELYSLEEEYKEFEEFFKKKVGSEPWSL----------QRTWAKRLLLG----------------ESFAIIAPTGVG  105 (1176)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH----------HHHHHHHHHCC----------------CCEEEECCCCCC
T ss_conf             6799999999999999999999868998488----------99999998668----------------974898889988


Q ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
Q ss_conf             789999999999980899669998085899999999999999985
Q gi|254781215|r   90 KTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLSL  134 (511)
Q Consensus        90 KS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~~  134 (511)
T Consensus       106 KTtfgl~~sly~a~--kgkks~~i~PT~~Lv~Q~~-~kl~~~~~~  147 (1176)
T PRK09401        106 KTTFGLVMALYLAK--KGKKSYIIFPTRLLVEQVV-EKLRKLAEK  147 (1176)
T ss_pred             HHHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHH-HHHHHHHHH
T ss_conf             88999999999986--5983999968889999999-999999997