HHsearch alignment for GI: 254781215 and conserved domain: PRK09401
>PRK09401 reverse gyrase; Reviewed.
Probab=97.06 E-value=0.011 Score=35.60 Aligned_cols=93 Identities=22% Similarity=0.307 Sum_probs=62.4
Q ss_pred HHHHHHHHCHHHHHHHHHHH---HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 88999870706665288667---764214557775655578458999999999998740565554210124650257659
Q gi|254781215|r 13 QKLFDLMWSDEIKLSFSNFV---LHFFPWGEKGTPLEGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIG 89 (511)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~---~~~~~w~~~~~~~~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~G 89 (511)
T Consensus 52 ~~~~~~~~~~~~~~~f~~fF~~~~G~~~w~~----------Qr~WakR~~~g----------------~SFaiiAPTG~G 105 (1176)
T PRK09401 52 KEYEELYSLEEEYKEFEEFFKKKVGSEPWSL----------QRTWAKRLLLG----------------ESFAIIAPTGVG 105 (1176)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH----------HHHHHHHHHCC----------------CCEEEECCCCCC
T ss_conf 6799999999999999999999868998488----------99999998668----------------974898889988
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
Q ss_conf 789999999999980899669998085899999999999999985
Q gi|254781215|r 90 KTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLSL 134 (511)
Q Consensus 90 KS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~~ 134 (511)
T Consensus 106 KTtfgl~~sly~a~--kgkks~~i~PT~~Lv~Q~~-~kl~~~~~~ 147 (1176)
T PRK09401 106 KTTFGLVMALYLAK--KGKKSYIIFPTRLLVEQVV-EKLRKLAEK 147 (1176)
T ss_pred HHHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHH-HHHHHHHHH
T ss_conf 88999999999986--5983999968889999999-999999997