HHsearch alignment for GI: 254781215 and conserved domain: PRK12377
>PRK12377 putative replication protein; Provisional.
Probab=93.86 E-value=0.45 Score=25.37 Aligned_cols=59 Identities=20% Similarity=0.218 Sum_probs=36.7
Q ss_pred CCCCCCHHHHHHHH---HHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 55578458999999---999998740565554210124650257659789999999999980899669998
Q gi|254781215|r 46 EGFSAPRSWQLEFM---EVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICL 113 (511)
Q Consensus 46 ~~~~~P~~WQ~e~l---~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vt 113 (511)
T Consensus 74 ~ny~~~~~~~~~a~~~a~~~~~~F~~~~-------~NlIf~G~pGtGKTHLA~AIg~~a~~~--G~sVlF~ 135 (248)
T PRK12377 74 ANYQVQNDGQRYALSQAKSIADELMTGC-------TNFVFSGKPGTGKNHLAAAIGNRLLAK--GRSVIVV 135 (248)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCC-------CEEEEECCCCCCHHHHHHHHHHHHHHC--CCEEEEE
T ss_conf 4564578789999999999999873188-------608998999987889999999999987--9969998