HHsearch alignment for GI: 254781215 and conserved domain: PTZ00110
>PTZ00110 helicase; Provisional.
Probab=97.39 E-value=0.0052 Score=37.60 Aligned_cols=79 Identities=18% Similarity=0.162 Sum_probs=57.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC------CCEEEEEECCH
Q ss_conf 565557845899999999999874056555421012465025765978999999999998089------96699980858
Q gi|254781215|r 44 PLEGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRP------GISVICLANSE 117 (511)
Q Consensus 44 ~~~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p------~~kv~vtApt~ 117 (511)
T Consensus 198 ~~~GF~~PTPIQ~qaIPiaLs------Gr------DvIgiAqTGSGKTLAFlLP~l~hi~~q~~~~~~~gP~aLILaPTR 265 (602)
T PTZ00110 198 EAAGFTEPTPIQVQGWPIALS------GR------DMIGIAETGSGKTLAFLLPAIVHINAQPLLRPGDGPIVLVLAPTR 265 (602)
T ss_pred HHCCCCCCCHHHHHHHHHHHC------CC------CEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHH
T ss_conf 976999999899999879856------98------679987897889999999999998516343678997699973839
Q ss_pred HHHHHHHHHHHHHHHHHC
Q ss_conf 999999999999999855
Q gi|254781215|r 118 TQLKTTLWAEVSKWLSLL 135 (511)
Q Consensus 118 ~Q~~~ilw~Ei~k~~~~~ 135 (511)
T Consensus 266 ELA~QI-~~e~~~~~~~~ 282 (602)
T PTZ00110 266 ELAEQI-REQALQFGRSS 282 (602)
T ss_pred HHHHHH-HHHHHHHHCCC
T ss_conf 999999-99999971547