HHsearch alignment for GI: 254781215 and conserved domain: TIGR03499

>TIGR03499 FlhF flagellar biosynthetic protein FlhF.
Probab=95.74  E-value=0.056  Score=31.06  Aligned_cols=45  Identities=16%  Similarity=0.076  Sum_probs=22.7

Q ss_pred             HHHHHHHHHHHHHHCCCC---EEEEEECCCCHHHHHHHHHC----CCEEEEECC
Q ss_conf             889999999999861888---29980068763688989864----982798427
Q gi|254781215|r  353 LRTTNNKISGLVEKYRPD---AIIIDANNTGARTCDYLEML----GYHVYRVLG  399 (511)
Q Consensus       353 ~~~~a~~i~~~~~~~~~~---~i~iD~~GvG~gV~d~L~~~----g~~v~~v~~  399 (511)
T Consensus       208 TTTiAKLAa~~~l~~~~~~V~lIT~DtyRi--gA~eQLk~ya~il~vp~~vv~~  259 (282)
T TIGR03499       208 TTTLAKLAARFVLEHGKKKVALITTDTYRI--GAVEQLKTYAKILGVPVKVARD  259 (282)
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEEECCCCH--HHHHHHHHHHHHHCCEEEEECC
T ss_conf             889999999999973899679998077767--8999999999995974899399