HHsearch alignment for GI: 254781215 and conserved domain: pfam00580

>pfam00580 UvrD-helicase UvrD/REP helicase. The Rep family helicases are composed of four structural domains. The Rep family function as dimers. REP helicases catalyse ATP dependent unwinding of double stranded DNA to single stranded DNA. Bacillus subtilis addA and Escherichia coli exodeoxyribonuclease V beta have large insertions near to the carboxy-terminus relative to other members of the family.
Probab=92.23  E-value=0.3  Score=26.48  Aligned_cols=50  Identities=16%  Similarity=0.218  Sum_probs=38.1

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHH--CCCCEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf             24650257659789999999999980--89966999808589999999999999998
Q gi|254781215|r   79 KGAISAGRGIGKTTLNAWLVLWLMST--RPGISVICLANSETQLKTTLWAEVSKWLS  133 (511)
Q Consensus        79 r~aV~sgrG~GKS~l~a~l~lw~l~~--~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~  133 (511)
T Consensus        15 ~llV~AgAGSGKT~~L~~Ri~~li~~~~~~p~~IL~lTFT~kAA~-----Em~~Ri~   66 (494)
T pfam00580        15 PLLVLAGAGTGKTRVLTERIAYLILEGGIDPEEILAVTFTNKAAR-----EMKERIL   66 (494)
T ss_pred             CEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHEEEEECHHHHHH-----HHHHHHH
T ss_conf             979997187068999999999999818999747876702899999-----9999999