HHsearch alignment for GI: 254781215 and conserved domain: smart00487

>smart00487 DEXDc DEAD-like helicases superfamily.
Probab=98.53  E-value=1.3e-06  Score=60.20  Aligned_cols=167  Identities=17%  Similarity=0.043  Sum_probs=89.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
Q ss_conf             55784589999999999987405655542101246502576597899999999999808996699980858999999999
Q gi|254781215|r   47 GFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWA  126 (511)
Q Consensus        47 ~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~  126 (511)
T Consensus         5 ~~~~~~~~Q~~~~~~~~~~~-----------~~~~i~~~tGsGKT~~~~~~~~~~~~~~~~~~~li~~P~~~l~~q~-~~   72 (201)
T smart00487        5 GFEPLRPYQKEAIEALLSGL-----------RDVILAAPTGSGKTLAALLPALEALKRGKGKRVLVLVPTRELAEQW-AE   72 (201)
T ss_pred             CCCCCCHHHHHHHHHHHCCC-----------CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHH-HH
T ss_conf             79999988999999998389-----------9889989999609999999999986338997599990859999999-98


Q ss_pred             HHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCH
Q ss_conf             9999998550001344432222223334443211123578-616985303575561002120267614999711102997
Q gi|254781215|r  127 EVSKWLSLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDS-KHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPD  205 (511)
Q Consensus       127 Ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d  205 (511)
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~i~t~~~l~~-~~~~~~-~~~~~~~~vIiDE~H~~~~  143 (201)
T smart00487       73 ELKKLGPSLGLKVVGLYGGDSK-------REQLRKLESGKTDILVTTPGRLLD-LLENDL-LELSNVDLVILDEAHRLLD  143 (201)
T ss_pred             HHHHCCCCCEEEEEEEECCCCH-------HHHHHHHHCCCCCEEEECHHHHHH-HHHHCC-CCCCCCEEEEEECHHHHHC
T ss_conf             8601021020445565247737-------999999975999899955899999-997275-4525431999989677512


Q ss_pred             -HHHHHHHHHHCCC-CCCEEEEEECCCCCCC
Q ss_conf             -8898888885079-9813899823899876
Q gi|254781215|r  206 -VINLGILGFLTER-NANRFWIMTSNPRRLS  234 (511)
Q Consensus       206 -~i~e~i~~~Lt~~-g~~~~~i~~~nP~~~~  234 (511)
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~i~lSAT~~~~~  174 (201)
T smart00487      144 GGFGDQLEKLLKLLPKNVQLLLLSATPPEEI  174 (201)
T ss_pred             CCCHHHHHHHHHHCCCCCCEEEECCCCCHHH
T ss_conf             5709999999996799997899924898689