HHsearch results for GI: 254781215 and protein with PDBid: 1q0u_A

>1q0u_A Bstdead; DEAD protein, RNA binding protein; 1.85A {Geobacillus stearothermophilus} SCOP: c.37.1.19
Probab=97.17  E-value=0.0028  Score=37.88  Aligned_cols=65  Identities=12%  Similarity=0.055  Sum_probs=48.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC-CCCEEEEEECCHHHHHHH
Q ss_conf             55784589999999999987405655542101246502576597899999999999808-996699980858999999
Q gi|254781215|r   47 GFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTR-PGISVICLANSETQLKTT  123 (511)
Q Consensus        47 ~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~-p~~kv~vtApt~~Q~~~i  123 (511)
                      +|..|.+-|+.++..|....            -+.|.|..|+|||.....-++..+... .+.+.++..|+...+...
T Consensus        23 g~~~pt~iQ~~aip~il~g~------------dvii~a~TGsGKTlayllp~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (219)
T 1q0u_A           23 RFYKPTEIQERIIPGALRGE------------SMVGQSQTGTGKTHAYLLPIMEKIKPERAEVQAVITAPTRELATQI   88 (219)
T ss_dssp             TCCSCCHHHHHHHHHHHHTC------------CEEEECCSSHHHHHHHHHHHHHHCCTTSCSCCEEEECSSHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHCCC------------CEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCHHHHHHHH
T ss_conf             99999999999999996799------------8899817999840577635554022345676530111205677777