HHsearch results for GI: 254781215 and protein with PDBid: 1uaa_A

>1uaa_A REP helicase, protein (ATP-dependent DNA helicase REP.); complex (helicase/DNA), DNA unwinding, hydrolase/DNA complex; HET: DNA; 3.00A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19

Probab=91.71  E-value=0.18  Score=26.50  Aligned_cols=43  Identities=16%  Similarity=0.192  Sum_probs=34.5

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHH--CCCCEEEEEECCHHHHH
Q ss_conf             24650257659789999999999980--89966999808589999
Q gi|254781215|r   79 KGAISAGRGIGKTTLNAWLVLWLMST--RPGISVICLANSETQLK  121 (511)
Q Consensus        79 r~aV~sgrG~GKS~l~a~l~lw~l~~--~p~~kv~vtApt~~Q~~  121 (511)
                      .+.|.+|=|+|||+.+...+.+.+..  .++.+|+|++-|..-+.
T Consensus        17 ~~lV~AgAGSGKT~tL~~ri~~Ll~~~~~~p~~Il~lTFT~~Aa~   61 (673)
T 1uaa_A           17 PCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAR   61 (673)
T ss_dssp             EEEECCCTTSCHHHHHHHHHHHHHHHHCCCGGGEEEEESSHHHHH
T ss_pred             CEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHEEEECCHHHHHH
T ss_conf             989998185489999999999999818989615988655599999