HHsearch results for GI: 254781215 and protein with PDBid: 1w36_D
>1w36_D RECD, exodeoxyribonuclease V alpha chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 PDB: 3k70_D*
Probab=97.87 E-value=0.00078 Score=41.42 Aligned_cols=147 Identities=22% Similarity=0.163 Sum_probs=76.4
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH--CCCCEEEEEECCHHHHHHHHHHHH
Q ss_conf 458999999999998740565554210124650257659789999999999980--899669998085899999999999
Q gi|254781215|r 51 PRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMST--RPGISVICLANSETQLKTTLWAEV 128 (511)
Q Consensus 51 P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~--~p~~kv~vtApt~~Q~~~ilw~Ei 128 (511)
..+||++++.....+. =+.|.+|=|+|||+++..++.+++.. .++.+|+++|||-.-+..+. ..+
T Consensus 150 ~~~~Q~~Av~~al~~~------------~~lI~GgpGTGKTtti~~~i~~l~~~~~~~~~~Ill~ApTgkAa~~L~-e~~ 216 (608)
T 1w36_D 150 EINWQKVAAAVALTRR------------ISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLT-ESL 216 (608)
T ss_dssp SCCHHHHHHHHHHTBS------------EEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCEEEEBSSHHHHHHHH-HHH
T ss_pred CCHHHHHHHHHHHCCC------------EEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH-HHH
T ss_conf 9889999999997099------------089993899729999999999999974157984999948399999999-998
Q ss_pred HHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHH
Q ss_conf 99998550001344432222223334443211123578616985303575561002120267614999711102997889
Q gi|254781215|r 129 SKWLSLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVIN 208 (511)
Q Consensus 129 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~ 208 (511)
.+-......... ..... .......+..+....... .+. .+. .+-....++++||++.++...+
T Consensus 217 ~~~~~~i~~~~~---~~~~~---~~~~~t~h~ll~~~~~~~-----~~~-~~~-----~~~~~~~~~ivDE~sm~~~~~~ 279 (608)
T 1w36_D 217 GKALRQLPLTDE---QKKRI---PEDASTLHRLLGAQPGSQ-----RLR-HHA-----GNPLHLDVLVVDEASMIDLPMM 279 (608)
T ss_dssp THHHHHSSCCSC---CCCSC---SCCCBTTTSCC-----------------CT-----TSCCSCSEEEECSGGGCBHHHH
T ss_pred HHHHHHCCCCCH---HHHHC---CCHHHHHHHHHHCCCCCH-----HHH-HHH-----HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 767740462200---33322---321556999974165303-----667-656-----4111223677678865419988
Q ss_pred HHHHHHHCCCCCCEEEEEECCC
Q ss_conf 8888885079981389982389
Q gi|254781215|r 209 LGILGFLTERNANRFWIMTSNP 230 (511)
Q Consensus 209 e~i~~~Lt~~g~~~~~i~~~nP 230 (511)
..+..++.. +.+. +..+-+
T Consensus 280 ~~~~~a~~~-~~~l--~l~gD~ 298 (608)
T 1w36_D 280 SRLIDALPD-HARV--IFLGDR 298 (608)
T ss_dssp HHHHHTCCT-TCEE--EEEECT
T ss_pred HHHHHHHHC-CCEE--EEECCH
T ss_conf 778776205-6479--983330