HHsearch results for GI: 254781215 and protein with PDBid: 1xti_A
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=95.53 E-value=0.031 Score=31.36 Aligned_cols=72 Identities=19% Similarity=0.242 Sum_probs=46.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH-CCCCEEEEEECCHHHHHHHHH
Q ss_conf 5578458999999999998740565554210124650257659789999999999980-899669998085899999999
Q gi|254781215|r 47 GFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMST-RPGISVICLANSETQLKTTLW 125 (511)
Q Consensus 47 ~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~-~p~~kv~vtApt~~Q~~~ilw 125 (511)
+|..|.+.|++++..+-. ++ -+-|.|+.|+|||.....-++-.+.. .....+++.+||...+..+.
T Consensus 27 gf~~~t~iQ~~ai~~~l~----g~--------dviv~apTGsGKTl~y~lp~l~~l~~~~~~~~~~il~pt~~l~~q~~- 93 (391)
T 1xti_A 27 GFEHPSEVQHECIPQAIL----GM--------DVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQIS- 93 (391)
T ss_dssp SCCSCCHHHHHHHHHHTT----TC--------CEEEECSSCSSHHHHHHHHHHHHCCCCTTCCCEEEECSCHHHHHHHH-
T ss_pred CCCCCCHHHHHHHHHHHC----CC--------CEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH-
T ss_conf 999999999999999974----99--------88998999845999999999996341578715999847899998789-
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254781215|r 126 AEVSKW 131 (511)
Q Consensus 126 ~Ei~k~ 131 (511)
..+.+.
T Consensus 94 ~~~~~l 99 (391)
T 1xti_A 94 KEYERF 99 (391)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999999