HHsearch results for GI: 254781215 and protein with PDBid: 1z63_A
>1z63_A Helicase of the SNF2/RAD54 hamily; protein-DNA complex, hydrolase/DNA complex complex; 3.00A {Sulfolobus solfataricus} SCOP: c.37.1.19 c.37.1.19 PDB: 1z6a_A
Probab=97.94 E-value=0.00026 Score=44.44 Aligned_cols=153 Identities=12% Similarity=0.051 Sum_probs=80.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHH
Q ss_conf 4589999999999987405655542101246502576597899999999999808996699980858999999999-999
Q gi|254781215|r 51 PRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWA-EVS 129 (511)
Q Consensus 51 P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~-Ei~ 129 (511)
-+++|++.++-+.....++. .+.++-.=|.|||..+..++.......+..+++|++|+. +..- |. |+.
T Consensus 38 L~~~Q~~gv~~~~~~~~~~~--------g~iLADe~GlGKT~~ai~~~~~~~~~~~~~~~LIV~P~s--l~~q-W~~Ei~ 106 (500)
T 1z63_A 38 LRPYQIKGFSWMRFMNKLGF--------GICLADDMGLGKTLQTIAVFSDAKKENELTPSLVICPLS--VLKN-WEEELS 106 (500)
T ss_dssp CCHHHHHHHHHHHHHHHTTC--------CEEECCCTTSCHHHHHHHHHHHHHHTTCCSSEEEEECST--THHH-HHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCC--------CEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECHH--HHHH-HHHHHH
T ss_conf 70999999999998253799--------889870896519899999999999848999789998689--9999-999999
Q ss_pred HHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHH
Q ss_conf 99985500013444322222233344432111235786169853035755610021202676149997111029978898
Q gi|254781215|r 130 KWLSLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINL 209 (511)
Q Consensus 130 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e 209 (511)
+|......... . .+... ........++...... ..... .+.....++|+|||+.+......
T Consensus 107 k~~~~~~v~~~-~------------~~~~~--~~~~~~~iii~~~~~~-~~~~~---~~~~~~~~vI~DEaH~~~~~~~~ 167 (500)
T 1z63_A 107 KFAPHLRFAVF-H------------EDRSK--IKLEDYDIILTTYAVL-LRDTR---LKEVEWKYIVIDEAQNIKNPQTK 167 (500)
T ss_dssp HHCTTSCEEEC-S------------SSTTS--CCGGGSSEEEEEHHHH-TTCHH---HHTCCEEEEEEETGGGGSCTTSH
T ss_pred HHCCCCEEEEE-C------------CCHHH--HHHCCCCEEEEEHHHH-HHHHH---HHHCCCCEEEEEHHHHHCCCHHH
T ss_conf 97798758751-4------------85134--2003587899843666-65667---65156437876143322130267
Q ss_pred HHHHHHCCCCCCEEEEEECCCCCCC
Q ss_conf 8888850799813899823899876
Q gi|254781215|r 210 GILGFLTERNANRFWIMTSNPRRLS 234 (511)
Q Consensus 210 ~i~~~Lt~~g~~~~~i~~~nP~~~~ 234 (511)
....... ..++..|+++++|..+.
T Consensus 168 ~~~~~~~-~~~~~rllLTgTP~~n~ 191 (500)
T 1z63_A 168 IFKAVKE-LKSKYRIALTGTPIENK 191 (500)
T ss_dssp HHHHHHT-SCEEEEEEECSSCSTTC
T ss_pred HHHHHHH-HCCCEEEEEECCCCCCC
T ss_conf 8888874-20574798511734587