HHsearch results for GI: 254781215 and protein with PDBid: 2j0s_A

>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=97.50  E-value=0.00035  Score=43.63  Aligned_cols=73  Identities=16%  Similarity=0.109  Sum_probs=48.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH-HCCCCEEEEEECCHHHHHHHHH
Q ss_conf             557845899999999999874056555421012465025765978999999999998-0899669998085899999999
Q gi|254781215|r   47 GFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMS-TRPGISVICLANSETQLKTTLW  125 (511)
Q Consensus        47 ~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~-~~p~~kv~vtApt~~Q~~~ilw  125 (511)
                      +|..|.++|++++..+-..      +      .+.|.+..|.|||......++..+. .....++++++||...+.++ .
T Consensus        56 g~~~pt~iQ~~ai~~~l~g------~------dvlv~apTGsGKTl~f~lp~l~~~~~~~~~~~~lil~Pt~~l~~q~-~  122 (410)
T 2j0s_A           56 GFEKPSAIQQRAIKQIIKG------R------DVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQI-Q  122 (410)
T ss_dssp             TCCSCCHHHHHHHHHHHTT------C------CEEEECCTTSSHHHHHHHHHHHTCCTTSCSCCEEEECSSHHHHHHH-H
T ss_pred             CCCCCCHHHHHHHHHHHCC------C------CEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHH-H
T ss_conf             9999899999999999869------9------9899899983689999999998313566786289993839999999-9


Q ss_pred             HHHHHHH
Q ss_conf             9999999
Q gi|254781215|r  126 AEVSKWL  132 (511)
Q Consensus       126 ~Ei~k~~  132 (511)
                      ..+.++.
T Consensus       123 ~~~~~~~  129 (410)
T 2j0s_A          123 KGLLALG  129 (410)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHH
T ss_conf             9999863