HHsearch results for GI: 254781215 and protein with PDBid: 2o0j_A
>2o0j_A Terminase, DNA packaging protein GP17; nucleotide-binding fold, hydrolase; HET: DNA ADP; 1.80A {Enterobacteria phage T4} PDB: 2o0h_A* 2o0k_A*
Probab=99.96 E-value=2.5e-26 Score=183.23 Aligned_cols=243 Identities=15% Similarity=0.124 Sum_probs=164.4
Q ss_pred CCCHHHHHHHHHHHHCHHHHHHHHHHHH-HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
Q ss_conf 4674678889998707066652886677-642145577756555784589999999999987405655542101246502
Q gi|254781215|r 6 PTNPETEQKLFDLMWSDEIKLSFSNFVL-HFFPWGEKGTPLEGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISA 84 (511)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~s 84 (511)
++.+++.+ ++ ..|.+||+-|+. |+..--.+ ..+-.|. |.++|+++|+++.+++ ...|..
T Consensus 126 ~~t~e~~~----e~--~kc~~dp~yF~~~y~~i~~~~-~G~ipF~-Lyp~Qkell~~~~~~R------------f~IvlK 185 (385)
T 2o0j_A 126 QWTREMVE----EW--KKCRDDIVYFAETYCAITHID-YGVIKVQ-LRDYQRDMLKIMSSKR------------MTVCNL 185 (385)
T ss_dssp CCCHHHHH----HH--HHHHHCHHHHHHHHCEEECSS-SCEEECC-CCHHHHHHHHHHHHSS------------EEEEEE
T ss_pred CCCHHHHH----HH--HHHHCCHHHHHHHEEEEECCC-CCEEECC-CCHHHHHHHHHHHHCC------------EEEEEE
T ss_conf 77999999----99--998419899986237998888-9855277-7699999999997504------------789996
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 57659789999999999980899669998085899999999999999985500013444322222233344432111235
Q gi|254781215|r 85 GRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLSLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGI 164 (511)
Q Consensus 85 grG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (511)
||++|||++++++++|+++++++.+++++|++.+|++.+ +..++.++..+|.......... ....+..
T Consensus 186 sRQ~GKTT~~a~~~L~~Alf~~~~~i~IiA~k~~~A~~i-~~~ik~~~e~lP~~~~~~~~~~-----------~~~~~~~ 253 (385)
T 2o0j_A 186 SRQLGKTTVVAIFLAHFVCFNKDKAVGILAHKGSMSAEV-LDRTKQAIELLPDFLQPGIVEW-----------NKGSIEL 253 (385)
T ss_dssp CSSSCHHHHHHHHHHHHHHSSSSCEEEEEESSHHHHHHH-HHHHHHHHHHSCTTTSCCEEEE-----------CSSEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH-HHHHHHHHHHCHHHHHHCCCHH-----------HHHHCCC
T ss_conf 266872087999999999726677148861537889999-9999999865616553023102-----------2231235
Q ss_pred CCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCC--HHHHHH-HHHHHCCCCCCEEEEEECCCCCCCCHHHHHH
Q ss_conf 7861698530357556100212026761499971110299--788988-8888507998138998238998765567653
Q gi|254781215|r 165 DSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTP--DVINLG-ILGFLTERNANRFWIMTSNPRRLSGKFYEIF 241 (511)
Q Consensus 165 ~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~--d~i~e~-i~~~Lt~~g~~~~~i~~~nP~~~~g~fy~~~ 241 (511)
.++..... +..++++.+|. ...++++||++.++ +.+|.+ +.+++++.+.+ ++++|||++. +.||++|
T Consensus 254 ~ngs~i~~----~a~s~da~RG~---~~~~lilDE~Afi~~~~e~~~~~~~~~~s~~~Gk--iIiiSTPNG~-N~FYdl~ 323 (385)
T 2o0j_A 254 DNGSSIGA----YASSPDAVRGN---SFAMIYIEDCAFIPNFHDSWLAIQPVISSGRRSK--IIITTTPNGL-NHFYDIW 323 (385)
T ss_dssp TTSCEEEE----EECSHHHHHTS---CCSEEEEESGGGSTTHHHHHHHHHHHHHSTTCCE--EEEEECCCSS-SHHHHHH
T ss_pred CCCCCEEE----CCCCCCCCCCC---CCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCE--EEEEECCCCC-CHHHHHH
T ss_conf 78631010----23455654542---0254203265410026888875313422489803--9999899987-0499999
Q ss_pred HC---CCCCCEEEEECCCCCCCC----------CHHHHHHHHHHCCCCHHHHHHHHCCCCCCCC
Q ss_conf 03---524741798404336778----------9778999997518980135444317566667
Q gi|254781215|r 242 NK---PLDDWKRFQIDTRTVEGI----------DPSFHEGIIARYGLDSDVTRVEVCGQFPQQD 292 (511)
Q Consensus 242 ~~---~~~~w~~~~i~~~~~p~~----------~~~~ie~~~~~~geds~~~r~evlgeFp~~~ 292 (511)
.. ....|..+.++|...|.. +.+|.++.++. .++..|+|||+|+|..++
T Consensus 324 ~~A~~g~n~f~~~~~~W~~~p~r~~~~~~~~dee~~~~~~~~~~--~s~~~F~QEYeceFlgSs 385 (385)
T 2o0j_A 324 TAAVEGKSGFEPYTAIWNSVKERLYNDEDIFDDGWQWSIQTING--SSLAQFRQEHTAAFEGTS 385 (385)
T ss_dssp HHHHTTCSSCEEEEECGGGSGGGGBCTTSBBCTTHHHHHHHHHT--SCHHHHHHHHSCCCSSCC
T ss_pred HHHHHCCCCCEEEEECCEECCCCCCCCCCCCHHHHHHHHHHHHC--CCHHHHHHHHCCEECCCC
T ss_conf 99870888863786140105552046888980799999998755--999999998498607879