HHsearch results for GI: 254781215 and protein with PDBid: 2oxc_A
>2oxc_A Probable ATP-dependent RNA helicase DDX20; DEAD, structural genomics, structural genomics consortium, SGC, hydrolase; HET: ADP; 1.30A {Homo sapiens} PDB: 3b7g_A*
Probab=97.48 E-value=0.00093 Score=40.92 Aligned_cols=74 Identities=18% Similarity=0.191 Sum_probs=54.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH-CCCCEEEEEECCHHHHHHHH
Q ss_conf 55578458999999999998740565554210124650257659789999999999980-89966999808589999999
Q gi|254781215|r 46 EGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMST-RPGISVICLANSETQLKTTL 124 (511)
Q Consensus 46 ~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~-~p~~kv~vtApt~~Q~~~il 124 (511)
.+|..|-+.|++++..+-. +. -+.+.|+.|+|||.....-++..+.. ....++++.+|+..-+..+
T Consensus 42 ~g~~~pt~iQ~~aip~il~----g~--------dvli~a~TGsGKTlay~lp~l~~~~~~~~~~~~lil~p~~~l~~q~- 108 (230)
T 2oxc_A 42 AGFERPSPVQLKAIPLGRC----GL--------DLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQI- 108 (230)
T ss_dssp TTCCSCCHHHHHHHHHHHT----TC--------CEEEECCTTSSHHHHHHHHHHHHCCTTSCSCCEEEECSSHHHHHHH-
T ss_pred CCCCCCCHHHHHHHHHHHC----CC--------CEEEEECCCCCCCEEEECCCHHHHHCCCCCCEEEECCCCHHHHHHH-
T ss_conf 7999999999999999857----99--------8999927987642023043023320035776234407999999988-
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254781215|r 125 WAEVSKWL 132 (511)
Q Consensus 125 w~Ei~k~~ 132 (511)
..++.+..
T Consensus 109 ~~~~~~l~ 116 (230)
T 2oxc_A 109 HSVITAIG 116 (230)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
T ss_conf 89988776