HHsearch results for GI: 254781215 and protein with PDBid: 2pl3_A
>2pl3_A Probable ATP-dependent RNA helicase DDX10; DEAD, structural genomics, structural genomics consortium, SGC, hydrolase; HET: ADP; 2.15A {Homo sapiens}
Probab=97.47 E-value=0.00088 Score=41.06 Aligned_cols=73 Identities=16% Similarity=0.048 Sum_probs=54.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC-----CCCEEEEEECCHHHHH
Q ss_conf 55784589999999999987405655542101246502576597899999999999808-----9966999808589999
Q gi|254781215|r 47 GFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTR-----PGISVICLANSETQLK 121 (511)
Q Consensus 47 ~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~-----p~~kv~vtApt~~Q~~ 121 (511)
+|+.|.+-|++++..+-... -+-+.|..|+|||.....-++..+.-. .+.++++.+||...+.
T Consensus 44 g~~~pt~iQ~~aip~il~g~------------dvl~~a~TGSGKTlayllp~l~~i~~~~~~~~~~~~~lil~pt~~la~ 111 (236)
T 2pl3_A 44 QYRLVTEIQKQTIGLALQGK------------DVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAY 111 (236)
T ss_dssp TCCBCCHHHHHHHHHHHTTC------------CEEEECCTTSCHHHHHHHHHHHHHHHTTCCGGGCCCEEEECSSHHHHH
T ss_pred CCCCCCHHHHHHHHHHHCCC------------CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHH
T ss_conf 99999999999999997799------------889980699970288867998754420033456846999758899997
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254781215|r 122 TTLWAEVSKWL 132 (511)
Q Consensus 122 ~ilw~Ei~k~~ 132 (511)
.+ +....+..
T Consensus 112 q~-~~~~~~l~ 121 (236)
T 2pl3_A 112 QT-FEVLRKVG 121 (236)
T ss_dssp HH-HHHHHHHT
T ss_pred HH-HHHHHHHH
T ss_conf 45-57766530