HHsearch results for GI: 254781215 and protein with PDBid: 2xau_A
>2xau_A PRE-mRNA-splicing factor ATP-dependent RNA helica; hydrolase, ribosome biogenesis, ATPase, ATP-binding, OB-fold; HET: ADP; 1.90A {Saccharomyces cerevisiae} PDB: 3kx2_B*
Probab=92.67 E-value=0.42 Score=24.21 Aligned_cols=157 Identities=17% Similarity=0.084 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999998740565554210124650257659789999999999980-89966999808589999999999999998
Q gi|254781215|r 55 QLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMST-RPGISVICLANSETQLKTTLWAEVSKWLS 133 (511)
Q Consensus 55 Q~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~-~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~ 133 (511)
..+||..|..|. =+-|.+..|+|||+-+--+++..... ..+++|+||-|..--+..+- ..++....
T Consensus 99 ~~~il~~i~~~~------------v~ii~G~TGsGKTTqvPq~ll~~~~~~~~~~~I~~tQPRRiaA~svA-~RVa~e~~ 165 (773)
T 2xau_A 99 RDEFLKLYQNNQ------------IMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVA-QRVAEEMD 165 (773)
T ss_dssp HHHHHHHHHHCS------------EEEEECCTTSSHHHHHHHHHHHHHCGGGGTCEEEEEESCHHHHHHHH-HHHHHHTT
T ss_pred HHHHHHHHHHCC------------EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHH-HHHHHHHC
T ss_conf 999999999799------------69998499898888999999983031379987999289789999999-99999849
Q ss_pred HCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC-CCCCCCCHHHHCCCCCCEEEEECCHHCCC---HHHHH
Q ss_conf 550001344432222223334443211123578616985303-57556100212026761499971110299---78898
Q gi|254781215|r 134 LLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRT-YSEERPDTFVGHHNTYGMAIINDEASGTP---DVINL 209 (511)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~ea~~G~h~~~~~lvI~DEAsgI~---d~i~e 209 (511)
... -....|.-.+... ........|++--. -+.-. + +..-.. ...+|+||++-=. |.+.-
T Consensus 166 ---~~l----G~~VGY~ir~e~~-----~s~~T~i~~~T~GiLLr~l~--~-d~~L~~-~s~iIlDEvHERs~~tD~ll~ 229 (773)
T 2xau_A 166 ---VKL----GEEVGYSIRFENK-----TSNKTILKYMTDGMLLREAM--E-DHDLSR-YSCIILDEAHERTLATDILMG 229 (773)
T ss_dssp ---CCB----TTTEEEEETTEEE-----CCTTCSEEEEEHHHHHHHHH--H-STTCTT-EEEEEECSGGGCCHHHHHHHH
T ss_pred ---CCC----CCEEEEEECCCCC-----CCCCCEEEEECHHHHHHHHH--H-CCCCCC-CCEEEECCCEECCCCHHHHHH
T ss_conf ---998----8856689557877-----89983699975299999985--4-866567-577995452015703899999
Q ss_pred HHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHH
Q ss_conf 888885079981389982389987655676530
Q gi|254781215|r 210 GILGFLTERNANRFWIMTSNPRRLSGKFYEIFN 242 (511)
Q Consensus 210 ~i~~~Lt~~g~~~~~i~~~nP~~~~g~fy~~~~ 242 (511)
.+.-.+... ...+++.+|-.. ....|-+.|.
T Consensus 230 llk~~~~~r-~~lklIlmSAT~-d~~~f~~yf~ 260 (773)
T 2xau_A 230 LLKQVVKRR-PDLKIIIMSATL-DAEKFQRYFN 260 (773)
T ss_dssp HHHHHHHHC-TTCEEEEEESCS-CCHHHHHHTT
T ss_pred HHHHHHHHC-CCCEEEEECCCC-CHHHHHHHCC
T ss_conf 999999858-884799941775-4788875338