HHsearch results for GI: 254781215 and protein with PDBid: 2z0m_A
>2z0m_A 337AA long hypothetical ATP-dependent RNA helicase DEAD; ATP-binding, hydrolase, nucleotide-binding, RNA binding protein, structural genomics; 1.90A {Sulfolobus tokodaii}
Probab=97.65 E-value=0.00021 Score=44.96 Aligned_cols=70 Identities=16% Similarity=0.163 Sum_probs=48.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
Q ss_conf 55784589999999999987405655542101246502576597899999999999808996699980858999999999
Q gi|254781215|r 47 GFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWA 126 (511)
Q Consensus 47 ~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~ 126 (511)
+|..|.+-|++++.++-.+ + .+.|.++.|.|||.+...-++ ..+.++++..||...+... ..
T Consensus 13 g~~~~~p~Q~~ai~~~l~g----~--------dviv~apTGsGKT~~~~lp~l-----~~~~~~lilvP~~~L~~q~-~~ 74 (337)
T 2z0m_A 13 GFKNFTEVQSKTIPLMLQG----K--------NVVVRAKTGSGKTAAYAIPIL-----ELGMKSLVVTPTRELTRQV-AS 74 (337)
T ss_dssp TCCSCCHHHHHHHHHHHTT----C--------CEEEECCTTSSHHHHHHHHHH-----HHTCCEEEECSSHHHHHHH-HH
T ss_pred CCCCCCHHHHHHHHHHHCC----C--------CEEEECCCCCHHHHHHHHHHH-----HHCCCEEEEECCHHHHHHH-HH
T ss_conf 9999999999999999849----9--------899989999569999999999-----8589889994678998888-88
Q ss_pred HHHHHHHH
Q ss_conf 99999985
Q gi|254781215|r 127 EVSKWLSL 134 (511)
Q Consensus 127 Ei~k~~~~ 134 (511)
++..+...
T Consensus 75 ~~~~~~~~ 82 (337)
T 2z0m_A 75 HIRDIGRY 82 (337)
T ss_dssp HHHHHTTT
T ss_pred HHHHHCCC
T ss_conf 77541034