HHsearch results for GI: 254781215 and protein with PDBid: 3b6e_A

>3b6e_A Interferon-induced helicase C domain-containing protein 1; DECH, DEXD/H RNA-binding helicase, innate immunity, IFIH1, structural genomics; 1.60A {Homo sapiens}
Probab=97.92  E-value=6.9e-06  Score=54.34  Aligned_cols=70  Identities=17%  Similarity=0.119  Sum_probs=50.5

Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH----CCCCEEEEEECCHHHHHHHHHH
Q ss_conf             458999999999998740565554210124650257659789999999999980----8996699980858999999999
Q gi|254781215|r   51 PRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMST----RPGISVICLANSETQLKTTLWA  126 (511)
Q Consensus        51 P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~----~p~~kv~vtApt~~Q~~~ilw~  126 (511)
                      +|+||.|++..+.++            ..+.|.++.|.|||.++..++...+..    .+..++++++|+..-+.+. +.
T Consensus        34 lr~~Q~eai~~~~~~------------~n~iv~~~TGsGKT~~~~~~~~~~l~~~~~~~~~~~~lvv~p~~~L~~q~-~~  100 (216)
T 3b6e_A           34 LRPYQMEVAQPALEG------------KNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLLVEQL-FR  100 (216)
T ss_dssp             CCHHHHHHHHHHHTT------------CCEEEECSCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEESSHHHHHHH-HH
T ss_pred             CCHHHHHHHHHHHHC------------CCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHH-HH
T ss_conf             899999999999958------------99899918998489999999999987321236786089980819999999-99


Q ss_pred             HHHHHHH
Q ss_conf             9999998
Q gi|254781215|r  127 EVSKWLS  133 (511)
Q Consensus       127 Ei~k~~~  133 (511)
                      +..+...
T Consensus       101 ~~~~~~~  107 (216)
T 3b6e_A          101 KEFQPFL  107 (216)
T ss_dssp             HTHHHHH
T ss_pred             HHHHHHC
T ss_conf             9998720