HHsearch results for GI: 254781215 and protein with PDBid: 3b6e_A
>3b6e_A Interferon-induced helicase C domain-containing protein 1; DECH, DEXD/H RNA-binding helicase, innate immunity, IFIH1, structural genomics; 1.60A {Homo sapiens}
Probab=97.92 E-value=6.9e-06 Score=54.34 Aligned_cols=70 Identities=17% Similarity=0.119 Sum_probs=50.5
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH----CCCCEEEEEECCHHHHHHHHHH
Q ss_conf 458999999999998740565554210124650257659789999999999980----8996699980858999999999
Q gi|254781215|r 51 PRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMST----RPGISVICLANSETQLKTTLWA 126 (511)
Q Consensus 51 P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~----~p~~kv~vtApt~~Q~~~ilw~ 126 (511)
+|+||.|++..+.++ ..+.|.++.|.|||.++..++...+.. .+..++++++|+..-+.+. +.
T Consensus 34 lr~~Q~eai~~~~~~------------~n~iv~~~TGsGKT~~~~~~~~~~l~~~~~~~~~~~~lvv~p~~~L~~q~-~~ 100 (216)
T 3b6e_A 34 LRPYQMEVAQPALEG------------KNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLLVEQL-FR 100 (216)
T ss_dssp CCHHHHHHHHHHHTT------------CCEEEECSCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEESSHHHHHHH-HH
T ss_pred CCHHHHHHHHHHHHC------------CCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHH-HH
T ss_conf 899999999999958------------99899918998489999999999987321236786089980819999999-99
Q ss_pred HHHHHHH
Q ss_conf 9999998
Q gi|254781215|r 127 EVSKWLS 133 (511)
Q Consensus 127 Ei~k~~~ 133 (511)
+..+...
T Consensus 101 ~~~~~~~ 107 (216)
T 3b6e_A 101 KEFQPFL 107 (216)
T ss_dssp HTHHHHH
T ss_pred HHHHHHC
T ss_conf 9998720