HHsearch results for GI: 254781215 and protein with PDBid: 3fe2_A
>3fe2_A Probable ATP-dependent RNA helicase DDX5; DEAD, ADP, ATP-binding, hydrolase, nucleotide- binding, RNA-binding, methylation, mRNA processing; HET: ADP; 2.60A {Homo sapiens}
Probab=96.77 E-value=0.016 Score=33.14 Aligned_cols=76 Identities=17% Similarity=0.146 Sum_probs=54.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC------CCEEEEEECCHHH
Q ss_conf 5557845899999999999874056555421012465025765978999999999998089------9669998085899
Q gi|254781215|r 46 EGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRP------GISVICLANSETQ 119 (511)
Q Consensus 46 ~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p------~~kv~vtApt~~Q 119 (511)
.+|..|-+-|++++..+-... -+.+.|..|+|||.....-++-.+...+ +..+++.+||...
T Consensus 47 ~g~~~pt~iQ~~aip~il~g~------------dviv~a~TGsGKTlay~lpi~~~~~~~~~~~~~~~~~~lil~pt~el 114 (242)
T 3fe2_A 47 QNFTEPTAIQAQGWPVALSGL------------DMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTREL 114 (242)
T ss_dssp TTCCSCCHHHHHHHHHHHHTC------------CEEEEECTTSCHHHHHHHHHHHHHHTSCCCCTTCCCSEEEECSSHHH
T ss_pred CCCCCCCHHHHHHHHHHHCCC------------CEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCHHH
T ss_conf 799999999999999997699------------88998279999602024611322103543334688579995685788
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999985
Q gi|254781215|r 120 LKTTLWAEVSKWLSL 134 (511)
Q Consensus 120 ~~~ilw~Ei~k~~~~ 134 (511)
+..+ ..++.+....
T Consensus 115 ~~q~-~~~~~~~~~~ 128 (242)
T 3fe2_A 115 AQQV-QQVAAEYCRA 128 (242)
T ss_dssp HHHH-HHHHHHHHHH
T ss_pred HHHH-HHHHHHHHCC
T ss_conf 7768-9999997234