HHsearch results for GI: 254781215 and protein with PDBid: 3i5x_A

>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, helicase, hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A*
Probab=97.69  E-value=0.00037  Score=43.44  Aligned_cols=78  Identities=17%  Similarity=0.075  Sum_probs=54.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH-----CCCCEEEEEECCHHHHH
Q ss_conf             5578458999999999998740565554210124650257659789999999999980-----89966999808589999
Q gi|254781215|r   47 GFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMST-----RPGISVICLANSETQLK  121 (511)
Q Consensus        47 ~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~-----~p~~kv~vtApt~~Q~~  121 (511)
                      +|..|.+-|++++..+-.    +.+      .-+.|.|..|+|||.....-++-.++.     ..+.++++++||...+.
T Consensus        91 gf~~~t~iQ~~ai~~il~----g~~------~dvlv~ApTGSGKTlay~lP~l~~l~~~~~~~~~~~~~lil~PtreLa~  160 (563)
T 3i5x_A           91 EFPGLTPVQQKTIKPILS----SED------HDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQYMVKAVIVAPTRDLAL  160 (563)
T ss_dssp             CCSSCCHHHHHHHHHHHS----SSS------EEEEEECCTTSCHHHHHHHHHHHHHHHTTTSSTTSCCEEEECSSHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHC----CCC------CCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHH
T ss_conf             999999999999999976----999------9889988998509999999999999844435678848999815599999


Q ss_pred             HHHHHHHHHHHHHC
Q ss_conf             99999999999855
Q gi|254781215|r  122 TTLWAEVSKWLSLL  135 (511)
Q Consensus       122 ~ilw~Ei~k~~~~~  135 (511)
                      ++ ..++.++....
T Consensus       161 Qi-~~~~~~~~~~~  173 (563)
T 3i5x_A          161 QI-EAEVKKIHDMN  173 (563)
T ss_dssp             HH-HHHHHHHHHHC
T ss_pred             HH-HHHHHHHHHHC
T ss_conf             99-99999998632