Query gi|254781216|ref|YP_003065629.1| hypothetical protein CLIBASIA_05615 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 38
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed Jun 1 11:42:34 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781216.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2vdfa1 f.4.4.2 (A:7-253) Oute 11.8 49 0.0036 14.7 1.7 13 18-30 204-216 (247)
2 d1k3va_ b.121.5.2 (A:) Parvovi 9.5 58 0.0042 14.3 1.4 14 11-24 449-462 (542)
3 d1lp3a_ b.121.5.2 (A:) Dependo 9.2 53 0.0039 14.5 1.1 14 11-24 422-435 (519)
4 d1c8da_ b.121.5.2 (A:) Parvovi 8.9 57 0.0041 14.4 1.2 16 11-26 454-469 (548)
5 d1mvma_ b.121.5.2 (A:) Parvovi 7.9 58 0.0042 14.3 0.8 12 14-25 454-465 (549)
6 d1s58a_ b.121.5.2 (A:) Parvovi 5.9 56 0.0041 14.4 -0.0 11 14-24 433-443 (536)
7 d2fqma1 d.378.1.1 (A:107-171) 5.3 33 0.0024 15.4 -1.5 10 22-31 44-53 (65)
8 d1hl2a_ c.1.10.1 (A:) N-acetyl 3.8 82 0.006 13.6 -0.4 16 7-22 1-16 (295)
9 d1oyja2 c.47.1.5 (A:2-85) Clas 3.7 74 0.0054 13.8 -0.7 21 14-34 53-73 (84)
10 d1v2aa2 c.47.1.5 (A:1-83) Clas 3.5 79 0.0058 13.7 -0.7 23 12-34 47-69 (83)
No 1
>d2vdfa1 f.4.4.2 (A:7-253) Outer membrane adhesin/invasin OpcA {Neisseria meningitidis [TaxId: 487]}
Probab=11.80 E-value=49 Score=14.68 Aligned_cols=13 Identities=31% Similarity=0.228 Sum_probs=10.8
Q ss_pred EEEEEEEECCCCC
Q ss_conf 5899998224430
Q gi|254781216|r 18 TIFIKFWNIEESS 30 (38)
Q Consensus 18 tifikfwnieess 30 (38)
.-|.+.|+|.+|.
T Consensus 204 gPfyRyW~Ik~S~ 216 (247)
T d2vdfa1 204 GPFYKQRTYKESG 216 (247)
T ss_dssp EEEEEEEEECCCC
T ss_pred CCEEEEEEECCCC
T ss_conf 2304654323675
No 2
>d1k3va_ b.121.5.2 (A:) Parvovirus (panleukopenia virus) capsid protein {Porcine parvovirus [TaxId: 10796]}
Probab=9.52 E-value=58 Score=14.33 Aligned_cols=14 Identities=21% Similarity=0.313 Sum_probs=10.0
Q ss_pred CCCCCCCEEEEEEE
Q ss_conf 01169985899998
Q gi|254781216|r 11 GYIGTPPTIFIKFW 24 (38)
Q Consensus 11 gyigtpptifikfw 24 (38)
|----||+||||.-
T Consensus 449 ~m~~PPpqIFIKm~ 462 (542)
T d1k3va_ 449 CKNNPPGQLFVKIA 462 (542)
T ss_dssp CSSCCCCEEEEEEC
T ss_pred CCCCCCCEEEEECC
T ss_conf 05899986899667
No 3
>d1lp3a_ b.121.5.2 (A:) Dependovirus capsid protein {Adeno-associated virus, aav-2 [TaxId: 272636]}
Probab=9.17 E-value=53 Score=14.51 Aligned_cols=14 Identities=43% Similarity=0.596 Sum_probs=9.7
Q ss_pred CCCCCCCEEEEEEE
Q ss_conf 01169985899998
Q gi|254781216|r 11 GYIGTPPTIFIKFW 24 (38)
Q Consensus 11 gyigtpptifikfw 24 (38)
|----||+||||.-
T Consensus 422 gm~~PPpqIFIK~~ 435 (519)
T d1lp3a_ 422 GLKHPPPQILIKNT 435 (519)
T ss_dssp EESSCSCCEEEEEC
T ss_pred CCCCCCCEEEEECC
T ss_conf 15799976898646
No 4
>d1c8da_ b.121.5.2 (A:) Parvovirus (panleukopenia virus) capsid protein {Canine parvovirus [TaxId: 10788]}
Probab=8.87 E-value=57 Score=14.37 Aligned_cols=16 Identities=19% Similarity=0.175 Sum_probs=10.6
Q ss_pred CCCCCCCEEEEEEEEC
Q ss_conf 0116998589999822
Q gi|254781216|r 11 GYIGTPPTIFIKFWNI 26 (38)
Q Consensus 11 gyigtpptifikfwni 26 (38)
|----||+||||.--+
T Consensus 454 gm~~PPpqIFIK~~P~ 469 (548)
T d1c8da_ 454 CQNNCPGQLFVKVAPN 469 (548)
T ss_dssp CSSCCCCCEEEEECCC
T ss_pred CCCCCCCEEEEECCCC
T ss_conf 0589997589954675
No 5
>d1mvma_ b.121.5.2 (A:) Parvovirus (panleukopenia virus) capsid protein {Murine minute virus, strain i [TaxId: 10794]}
Probab=7.85 E-value=58 Score=14.34 Aligned_cols=12 Identities=8% Similarity=0.401 Sum_probs=8.5
Q ss_pred CCCCEEEEEEEE
Q ss_conf 699858999982
Q gi|254781216|r 14 GTPPTIFIKFWN 25 (38)
Q Consensus 14 gtpptifikfwn 25 (38)
--||+||||.--
T Consensus 454 ~PPPqIFIK~~P 465 (549)
T d1mvma_ 454 NAPGQMLVRLGP 465 (549)
T ss_dssp CCCCEEEECCCC
T ss_pred CCCCEEEEECCC
T ss_conf 999858985566
No 6
>d1s58a_ b.121.5.2 (A:) Parvovirus (panleukopenia virus) capsid protein {Human parvovirus B19 [TaxId: 10798]}
Probab=5.88 E-value=56 Score=14.39 Aligned_cols=11 Identities=45% Similarity=0.957 Sum_probs=8.0
Q ss_pred CCCCEEEEEEE
Q ss_conf 69985899998
Q gi|254781216|r 14 GTPPTIFIKFW 24 (38)
Q Consensus 14 gtpptifikfw 24 (38)
--||.||||.-
T Consensus 433 ~PPpqIFIK~~ 443 (536)
T d1s58a_ 433 QPPPQIFLKIL 443 (536)
T ss_dssp SCSCCEECCBC
T ss_pred CCCCEEEEECC
T ss_conf 99981798567
No 7
>d2fqma1 d.378.1.1 (A:107-171) Phosphoprotein P (M1) {Vesicular stomatitis indiana virus [TaxId: 11277]}
Probab=5.29 E-value=33 Score=15.45 Aligned_cols=10 Identities=40% Similarity=0.893 Sum_probs=6.9
Q ss_pred EEEECCCCCE
Q ss_conf 9982244301
Q gi|254781216|r 22 KFWNIEESSA 31 (38)
Q Consensus 22 kfwnieessa 31 (38)
|+||+.|.+.
T Consensus 44 kyWNlaEC~i 53 (65)
T d2fqma1 44 KHWNLAECTF 53 (65)
T ss_dssp HHSCGGGSEE
T ss_pred CCCCHHHEEE
T ss_conf 3256545289
No 8
>d1hl2a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Escherichia coli [TaxId: 562]}
Probab=3.80 E-value=82 Score=13.61 Aligned_cols=16 Identities=31% Similarity=0.420 Sum_probs=10.3
Q ss_pred CCCCCCCCCCCEEEEE
Q ss_conf 6502011699858999
Q gi|254781216|r 7 TNFKGYIGTPPTIFIK 22 (38)
Q Consensus 7 tnfkgyigtpptifik 22 (38)
|||+|.+..++|-|-+
T Consensus 1 t~l~Gv~~~~~TPf~~ 16 (295)
T d1hl2a_ 1 TNLRGVMAALLTPFDQ 16 (295)
T ss_dssp CCCCSEEEECCCCBCT
T ss_pred CCCCEEEEEEECCCCC
T ss_conf 9986651406777998
No 9
>d1oyja2 c.47.1.5 (A:2-85) Class tau GST {Rice (Oryza sativa) [TaxId: 4530]}
Probab=3.74 E-value=74 Score=13.82 Aligned_cols=21 Identities=24% Similarity=0.238 Sum_probs=15.7
Q ss_pred CCCCEEEEEEEECCCCCEEEC
Q ss_conf 699858999982244301100
Q gi|254781216|r 14 GTPPTIFIKFWNIEESSAILH 34 (38)
Q Consensus 14 gtpptifikfwnieessailh 34 (38)
|+.|++...=..+-||.+|+.
T Consensus 53 g~vP~L~~~g~~l~eS~~I~~ 73 (84)
T d1oyja2 53 RKIPVLLHAGRPVSESLVILQ 73 (84)
T ss_dssp CCSCEEEETTEEEESHHHHHH
T ss_pred CCCCEEEECCCEEECHHHHHH
T ss_conf 825689989906772999999
No 10
>d1v2aa2 c.47.1.5 (A:1-83) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-6 [TaxId: 123217]}
Probab=3.55 E-value=79 Score=13.68 Aligned_cols=23 Identities=30% Similarity=0.065 Sum_probs=16.5
Q ss_pred CCCCCCEEEEEEEECCCCCEEEC
Q ss_conf 11699858999982244301100
Q gi|254781216|r 12 YIGTPPTIFIKFWNIEESSAILH 34 (38)
Q Consensus 12 yigtpptifikfwnieessailh 34 (38)
-.|+-|++...=..+-||.||+.
T Consensus 47 P~g~VP~L~~~g~~l~eS~aI~~ 69 (83)
T d1v2aa2 47 PQHTIPTLVDNGHVVWESYAIVL 69 (83)
T ss_dssp TTCCSCEEEETTEEEESHHHHHH
T ss_pred HCCCCCEEEECCCEEECHHHHHH
T ss_conf 31687778984620684999999
Done!