HHsearch alignment for GI: 254781217 and conserved domain: COG2963

>COG2963 Transposase and inactivated derivatives [DNA replication, recombination, and repair].

Probab=93.25  E-value=0.19  Score=30.60  Aligned_cols=43  Identities=23%  Similarity=0.390  Sum_probs=36.6

Q ss_pred             CHHCCHHHHHHHHHHHH-CCHHHHHHHHCCCC-CHHHHHHHHHHC
Q ss_conf             12429999999999974-89579999721799-978999999848
Q gi|254781217|r    3 AHKYTKERIDNILASFS-GGLSLSQSCKKHGV-TVVSFHGWVKQD   45 (162)
Q Consensus         3 ~~Kyt~el~d~Ic~~Ia-~G~SLr~Ick~~gm-p~~Tv~~Wl~kd   45 (162)
T Consensus         5 ~r~~s~EfK~~iv~~~~~~g~sv~~vAr~~gv~~~~~l~~W~~~~   49 (116)
T COG2963           5 RKKYSPEFKLEAVALYLRGGDTVSEVAREFGIVSATQLYKWRIQL   49 (116)
T ss_pred             CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             364899999999999981783599999994877537899999999