HHSEARCH alignment of GI: 254781217 and SCOP domain: d2jn6a1

Alignment

Probab=96.52  E-value=0.0012  Score=42.13  Aligned_cols=45  Identities=24%  Similarity=0.464  Sum_probs=39.7

Q ss_pred             CCCHHCCHHHHHHHHHHHH--CCHHHHHHHHCCCCCHHHHHHHHHHC
Q ss_conf             9712429999999999974--89579999721799978999999848
Q gi|254781217|r    1 MYAHKYTKERIDNILASFS--GGLSLSQSCKKHGVTVVSFHGWVKQD   45 (162)
Q Consensus         1 m~~~Kyt~el~d~Ic~~Ia--~G~SLr~Ick~~gmp~~Tv~~Wl~kd   45 (162)
                      |.-.+||+|+=.++.....  .|.|++.||++.|++.+|+++|+++.
T Consensus         1 M~rk~Ys~EfK~~aV~l~~~~~g~s~~~vA~~lGIs~~tl~~W~k~~   47 (89)
T d2jn6a1           1 MPTKTYSEEFKRDAVALYENSDGASLQQIANDLGINRVTLKNWIIKY   47 (89)
T ss_dssp             CCCCCCCHHHHHHHHHHHTTGGGSCHHHHHHHHTSCHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHH
T ss_conf             94798999999999999998299859999999798988999999998

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Cgl2762-like
domain: Uncharacterized protein Cgl2762
species: Corynebacterium glutamicum [TaxId: 1718]