HHsearch alignment for GI: 254781218 and conserved domain: COG4800
>COG4800 Predicted transcriptional regulator with an HTH domain [Transcription].
Probab=96.80 E-value=0.008 Score=37.26 Aligned_cols=54 Identities=24% Similarity=0.354 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 6777999999999729838999999779999999974148899989999999982
Q gi|254781218|r 111 PYAIGARLKSIRKDKGMSQIEFGKLLGMPNSTLSNYEQGRTIPEIKPARKIKQVT 165 (205)
Q Consensus 111 ~~~iG~rLk~lR~~~glsq~elA~~lgis~~tis~~E~g~~~Ps~~~l~kIa~~l 165 (205)
T Consensus 14 ~E~F~~~l~~~l~Elglt~~eFak~anIP~StLYKil~G-~dpr~~tl~~I~kti 67 (170)
T COG4800 14 GEDFGSCLQKLLDELGLTPSEFAKRANIPLSTLYKILKG-SDPRYDTLTRIFKTI 67 (170)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHC-CCCCHHHHHHHHHHH
T ss_conf 007999999999981999899988709989999999817-996577899999999