HHsearch alignment for GI: 254781218 and conserved domain: PRK09943

>PRK09943 DNA-binding transcriptional repressor PuuR; Provisional.
Probab=99.57  E-value=1e-14  Score=110.69  Aligned_cols=70  Identities=20%  Similarity=0.196  Sum_probs=64.2

Q ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCC
Q ss_conf             9999999999999998599889999984899999998877998889999999999828999996145322
Q gi|254781218|r   27 QYWKDVGTRIKDIRKANNKTQKEMAIGANQLESAVNLFENGMCSTSIRYALYLRNEYEISFDWIYDGEVI   96 (205)
Q Consensus        27 ~~~~~iG~rik~lR~~~gltQ~elA~~~gis~~~is~~E~G~~~psi~~l~~la~~~~vs~d~Ll~ge~~   96 (205)
T Consensus         3 d~~~~iG~rIr~lR~~~glTL~eLA~~sGvS~s~LSqIErg~~~PSl~tL~kIa~aL~v~l~~lf~~~~~   72 (185)
T PRK09943          3 DEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEK   72 (185)
T ss_pred             CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCC
T ss_conf             4032488999999998599899999887969999999987999999999999999849999998277455