HHsearch alignment for GI: 254781218 and conserved domain: TIGR00721
>TIGR00721 tfx DNA-binding protein, Tfx family; InterPro: IPR004645 This is a family of Tfx DNA-binding proteins, which is restricted to the archaea. Homology among the members is strongest in the helix-turn-helix-containing N-terminal region. Tfx from Methanobacterium thermoautotrophicum is associated with the operon for molybdenum formyl-methanofuran dehydrogenase and binds a DNA sequence near its promoter.; GO: 0003677 DNA binding.
Probab=94.45 E-value=0.027 Score=33.99 Aligned_cols=28 Identities=21% Similarity=0.190 Sum_probs=24.8
Q ss_pred HCCCCHHHHHHHHCCCHHHHHHHHCCCC
Q ss_conf 8599889999984899999998877998
Q gi|254781218|r 42 ANNKTQKEMAIGANQLESAVNLFENGMC 69 (205)
Q Consensus 42 ~~gltQ~elA~~~gis~~~is~~E~G~~ 69 (205)
T Consensus 19 ~kGl~Q~eIAk~LkTtRaNvS~iEkrA~ 46 (142)
T TIGR00721 19 EKGLKQKEIAKILKTTRANVSIIEKRAL 46 (142)
T ss_pred HCCCCHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 3388878898772672013789888744