HHsearch alignment for GI: 254781218 and conserved domain: pfam01371

>pfam01371 Trp_repressor Trp repressor protein. This protein binds to tryptophan and represses transcription of the Trp operon.

Probab=90.58  E-value=0.55  Score=25.92  Aligned_cols=38  Identities=13%  Similarity=0.136  Sum_probs=21.7

Q ss_pred             HHHHHHHHHHHH--HHCCCCHHHHHHHHCCCHHHHHHHHC
Q ss_conf             999999999999--98599889999984899999998877
Q gi|254781218|r   29 WKDVGTRIKDIR--KANNKTQKEMAIGANQLESAVNLFEN   66 (205)
Q Consensus        29 ~~~iG~rik~lR--~~~gltQ~elA~~~gis~~~is~~E~   66 (205)
T Consensus        32 ~~ala~R~~va~~LL~~~~syreI~~~~g~S~aTItRvsr   71 (88)
T pfam01371        32 REALAQRLRIAKELLRGELSQREIAQELGASIATITRGSN   71 (88)
T ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH
T ss_conf             9999999999999997899899999985985231478899