HHsearch alignment for GI: 254781218 and conserved domain: pfam01710
>pfam01710 Transposase_14 Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes insertion sequences from Synechocystis PCC 6803 three of which are characterized as homologous to bacterial IS5- and IS4- and to several members of the IS630-Tc1-mariner superfamily.
Probab=94.10 E-value=0.34 Score=27.17 Aligned_cols=90 Identities=12% Similarity=0.116 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHH
Q ss_conf 99999999999999859988999998489999999887799888999999999982899999614532210000232134
Q gi|254781218|r 28 YWKDVGTRIKDIRKANNKTQKEMAIGANQLESAVNLFENGMCSTSIRYALYLRNEYEISFDWIYDGEVIDRRYEDVTNKK 107 (205)
Q Consensus 28 ~~~~iG~rik~lR~~~gltQ~elA~~~gis~~~is~~E~G~~~psi~~l~~la~~~~vs~d~Ll~ge~~~~~~~~~~~~~ 107 (205)
T Consensus 3 YS~DlR~rVl~~ve-~G~S~~eaA~~F~Is~~Tv~rWlkr~~~~~----------------------~~~~~----r~~~ 55 (120)
T pfam01710 3 YSLDLRKKVIDYIE-SGGSITEASKVFQIGRATIYRWLKREKLGA----------------------LKVEP----RGRH 55 (120)
T ss_pred CCHHHHHHHHHHHH-CCCCHHHHHHHHCCCHHHHHHHHHCHHCCC----------------------CCCCC----CCCC
T ss_conf 76899999999998-699999999993702999999985500147----------------------78888----8988
Q ss_pred HHHHHHHHHHHH-HHHHHCCCCHHHHHHHHCCCHHHHHHHHC
Q ss_conf 554677799999-99997298389999997799999999741
Q gi|254781218|r 108 RLDPYAIGARLK-SIRKDKGMSQIEFGKLLGMPNSTLSNYEQ 148 (205)
Q Consensus 108 ~~d~~~iG~rLk-~lR~~~glsq~elA~~lgis~~tis~~E~ 148 (205)
T Consensus 56 Kid~----~~L~~~V~~~pD~tl~E~A~~~gVs~~tI~~aLk 93 (120)
T pfam01710 56 KIDR----DALKNDVKDNPDAYLKERAKKFGVTPSSIHYALK 93 (120)
T ss_pred CCCH----HHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHH
T ss_conf 7789----9999999988672099999983987999999999