HHsearch alignment for GI: 254781218 and conserved domain: smart00354

>smart00354 HTH_LACI helix_turn _helix lactose operon repressor.

Probab=92.66  E-value=0.32  Score=27.35  Aligned_cols=45  Identities=13%  Similarity=0.150  Sum_probs=36.1

Q ss_pred             CHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHH---HHHHCCCHHHH
Q ss_conf             3899999977999999997414889998999999---99828999995
Q gi|254781218|r  128 SQIEFGKLLGMPNSTLSNYEQGRTIPEIKPARKI---KQVTKKHLDWI  172 (205)
Q Consensus       128 sq~elA~~lgis~~tis~~E~g~~~Ps~~~l~kI---a~~lgvs~d~L  172 (205)
T Consensus         2 Ti~dvA~~aGVS~sTVSr~ln~~~~Vs~~tr~rV~~~a~~lgY~pn~~   49 (70)
T smart00354        2 TIKDVARLAGVSKATVSRVLNGNGRVSEETREKVLAAMEELGYIPNRV   49 (70)
T ss_pred             CHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHH
T ss_conf             899999998959999999977999899999999999999978998999