HHsearch alignment for GI: 254781218 and conserved domain: smart00530

>smart00530 HTH_XRE Helix-turn-helix XRE-family like proteins.

Probab=99.29  E-value=8.8e-12  Score=92.61  Aligned_cols=56  Identities=36%  Similarity=0.602  Sum_probs=54.7

Q ss_pred             HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHH
Q ss_conf             99999997298389999997799999999741488999899999999828999995
Q gi|254781218|r  117 RLKSIRKDKGMSQIEFGKLLGMPNSTLSNYEQGRTIPEIKPARKIKQVTKKHLDWI  172 (205)
Q Consensus       117 rLk~lR~~~glsq~elA~~lgis~~tis~~E~g~~~Ps~~~l~kIa~~lgvs~d~L  172 (205)
T Consensus         1 rlr~~R~~~glsq~~lA~~~gis~~~is~~E~g~~~p~~~~l~~ia~~l~~~~~~l   56 (56)
T smart00530        1 RLKELREEKGLTQEELAEKLGVSRSTLSRIENGKRKPSLETLKKLAKALGVSLDEL   56 (56)
T ss_pred             CHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHC
T ss_conf             98999977299999999998959999999997998999999999999988889879