HHsearch results for GI: 254781218 and protein with PDBid: 3fmy_A
>3fmy_A HTH-type transcriptional regulator MQSA (YGIT/B3021); helix-turn-helix, DNA-binding, transcription regulation, DNA binding protein; HET: MEQ; 1.40A {Escherichia coli k-12}
Probab=99.23 E-value=6.9e-12 Score=91.91 Aligned_cols=58 Identities=24% Similarity=0.387 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHH
Q ss_conf 79999999997298389999997799999999741488999899999999828999995
Q gi|254781218|r 114 IGARLKSIRKDKGMSQIEFGKLLGMPNSTLSNYEQGRTIPEIKPARKIKQVTKKHLDWI 172 (205)
Q Consensus 114 iG~rLk~lR~~~glsq~elA~~lgis~~tis~~E~g~~~Ps~~~l~kIa~~lgvs~d~L 172 (205)
.|++|+++|+.+||||.+||+.+|++++++++||+|++.|+.. +.+|+++|+++++||
T Consensus 12 ~p~~ik~~R~~~gltQ~elA~~lgvs~~ti~~~E~G~~~P~~~-~~~l~~~l~~~P~~l 69 (73)
T 3fmy_A 12 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAXPHPS-TIKLLRVLDKHPELL 69 (73)
T ss_dssp CHHHHHHHHHHTTCCHHHHHHHHCSCTTHHHHHHTTSSCCCHH-HHHHHHHHHHCGGGH
T ss_pred CHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHH-HHHHHHHHCCCHHHH
T ss_conf 9999999999859999999999897999999999799799999-999999987791888