HHsearch results for GI: 254781218 and protein with PDBid: 3fmy_A

>3fmy_A HTH-type transcriptional regulator MQSA (YGIT/B3021); helix-turn-helix, DNA-binding, transcription regulation, DNA binding protein; HET: MEQ; 1.40A {Escherichia coli k-12}
Probab=99.18  E-value=1.3e-11  Score=90.24  Aligned_cols=59  Identities=19%  Similarity=0.090  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHH
Q ss_conf             999999999985998899999848999999988779988899999999998289999961
Q gi|254781218|r   32 VGTRIKDIRKANNKTQKEMAIGANQLESAVNLFENGMCSTSIRYALYLRNEYEISFDWIY   91 (205)
Q Consensus        32 iG~rik~lR~~~gltQ~elA~~~gis~~~is~~E~G~~~psi~~l~~la~~~~vs~d~Ll   91 (205)
                      .|++||.+|+.+||||++||+.+||++++|++||+|.+.|+.. +.+|+..|++++++|.
T Consensus        12 ~p~~ik~~R~~~gltQ~elA~~lgvs~~ti~~~E~G~~~P~~~-~~~l~~~l~~~P~~l~   70 (73)
T 3fmy_A           12 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAXPHPS-TIKLLRVLDKHPELLN   70 (73)
T ss_dssp             CHHHHHHHHHHTTCCHHHHHHHHCSCTTHHHHHHTTSSCCCHH-HHHHHHHHHHCGGGHH
T ss_pred             CHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHH-HHHHHHHHCCCHHHHH
T ss_conf             9999999999859999999999897999999999799799999-9999999877918888