PSIBLAST alignment of GI: 254781218 and protein with PDB id: 1y9q

>gi|60594530|pdb|1Y9Q|A Chain A, Crystal Structure Of Hth_3 Family Transcriptional Regulator From Vibrio Cholerae Length = 192

 Score = 62.7 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 27/69 (39%)

Query: 28 YWKDVGTRIKDIRKANNKTQKEMAIGANQLESAVNLFENGMCSTSIRYALYLRNEYEISF 87
          +   +  ++K++RK+   +    A      ++ +   E G  S +I     + +  E SF
Sbjct: 8  FKSQIANQLKNLRKSRGLSLDATAQLTGVSKAXLGQIERGESSPTIATLWKIASGLEASF 67

Query: 88 DWIYDGEVI 96
             +  +  
Sbjct: 68 SAFFANDPQ 76