Query gi|254781219|ref|YP_003065632.1| hypothetical protein CLIBASIA_05630 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 200
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed Jun 1 11:47:21 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781219.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1k8ta_ e.41.1.1 (A:) Adenylyl 65.6 4.3 0.00031 18.7 4.8 87 76-163 320-426 (509)
2 d1yova1 c.111.1.2 (A:6-534) Am 43.7 9.6 0.0007 16.4 4.1 15 141-155 420-434 (529)
3 d1q5za_ a.196.1.1 (A:) Invasio 32.0 14 0.001 15.1 4.1 38 44-87 103-140 (145)
4 d2peqa1 a.280.1.1 (A:2-109) Ru 27.5 17 0.0012 14.6 3.4 28 22-57 53-80 (108)
5 d2peoa1 a.280.1.1 (A:1-115) Ru 25.8 18 0.0013 14.4 3.1 15 42-56 65-79 (115)
6 d2hxja1 a.136.1.1 (A:3-118) Hy 23.5 3.7 0.00027 19.2 -1.7 97 55-176 4-106 (116)
7 d2py8a1 a.280.1.1 (A:2-121) Ru 20.5 23 0.0017 13.7 3.7 28 22-57 53-80 (120)
8 d2p4ka1 a.2.11.1 (A:1-83) Mn s 19.7 12 0.00088 15.6 0.3 15 120-136 62-76 (83)
9 d1p7ga1 a.2.11.1 (A:12-103) Fe 19.3 12 0.00091 15.6 0.3 15 164-178 17-31 (92)
10 d1jr9a1 a.2.11.1 (A:2-91) Mn s 19.1 12 0.00088 15.7 0.2 15 164-178 12-26 (90)
No 1
>d1k8ta_ e.41.1.1 (A:) Adenylylcyclase toxin (the edema factor) {Bacillus anthracis [TaxId: 1392]}
Probab=65.55 E-value=4.3 Score=18.74 Aligned_cols=87 Identities=30% Similarity=0.398 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHH-------H--HHHH-------HHHCHHHHHHH---H-HHHHHHHHHHHHHHHHHHHCCHHCCCCCHH
Q ss_conf 7999999997535-------7--7777-------64121579987---6-368889999999999853010103643224
Q gi|254781219|r 76 SLSHFIEGLIESE-------R--SKIT-------EKFKPLAVAKV---V-SDELLHDKLNKILKKSVRNYSRDSGHLNRD 135 (200)
Q Consensus 76 slshfiegliese-------r--skit-------ekfkplavakv---v-sdellhdklnkilkksvrnysrdsghlnrd 135 (200)
+++.||+--|..+ | +||. |--.|...||+ - |.|| -..|..|+|-+-...++||||-..-
T Consensus 320 ~~~~fi~~ni~~~~~~~y~nr~y~k~~~~n~~~i~w~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (509)
T d1k8ta_ 320 MTGRFIEKNITGKDYLYYFNRSYNKIAPGNKAYIEWTDPITKAKINTIPTSAEF-IKNLSSIRRSSNVGVYKDSGDKDEF 398 (509)
T ss_dssp HHHHHHHHHTGGGTBCCCCSSCCCSSCCCSSCCCCEECTTTCCEECSCCCHHHH-HHHHHHHHHHHCSCSBCCSSCSSHH
T ss_pred HHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCCEEECCCCCCHHHHCCCCCHHHH-HHHHHHHHHHCCCEEEECCCCCHHH
T ss_conf 999999974226763898513456634665241663688523232058876999-9988999864262267235652123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf 5666578999999999999985208815
Q gi|254781219|r 136 VIFHSRYALIRYLEDFYKEIKHTFGNPA 163 (200)
Q Consensus 136 vifhsryaliryledfykeikhtfgnpa 163 (200)
.--.|--.+-.|++|+|....|-||...
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (509)
T d1k8ta_ 399 AKKESVKKIAGYLSDYYNSANHIFSQEK 426 (509)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGCCCHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf 3354599997668874263334223110
No 2
>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.73 E-value=9.6 Score=16.35 Aligned_cols=15 Identities=27% Similarity=0.545 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 789999999999999
Q gi|254781219|r 141 RYALIRYLEDFYKEI 155 (200)
Q Consensus 141 ryaliryledfykei 155 (200)
-|..+|-+.-|+++-
T Consensus 420 l~~~~~a~~~f~~~~ 434 (529)
T d1yova1 420 LYLMLRAVDRFHKQQ 434 (529)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999984
No 3
>d1q5za_ a.196.1.1 (A:) Invasion protein A (SipA) , C-terminal actin binding domain {Salmonella typhimurium [TaxId: 90371]}
Probab=32.00 E-value=14 Score=15.13 Aligned_cols=38 Identities=34% Similarity=0.643 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999999997654064369872899510367799999999753
Q gi|254781219|r 44 RDKIIELRRKFAKENGLKTVTEVCPKPKDITYSLSHFIEGLIES 87 (200)
Q Consensus 44 rdkiielrrkfakenglktvtevcpkpkdityslshfieglies 87 (200)
|.|.-|.-+.|+.|.||. |-.+...|-+|....|||+.
T Consensus 103 rekLae~Alqf~REAgLt------~lk~etdylls~~LDgli~d 140 (145)
T d1q5za_ 103 KEKLAEIALQFAREAGLT------RLKGETDYVLSNVLDGLIGD 140 (145)
T ss_dssp HHHHHHHHHHHHHHHCTT------TTGGGSCHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHCCCC------CCCCCCCHHHHHHHHHHHCC
T ss_conf 899999999999971877------44576328999999987514
No 4
>d2peqa1 a.280.1.1 (A:2-109) RuBisCo chaperone RbcX {Synechococcus sp. pcc 7002 [TaxId: 32049]}
Probab=27.48 E-value=17 Score=14.61 Aligned_cols=28 Identities=25% Similarity=0.414 Sum_probs=13.0
Q ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999886418011113678878999999999997654
Q gi|254781219|r 22 DKWCEALYSPESYSNTYREQKLRDKIIELRRKFAKE 57 (200)
Q Consensus 22 dkwcealyspesysntyreqklrdkiielrrkfake 57 (200)
|.||++|..- .+.|--.|++.|..+|++
T Consensus 53 d~~l~~L~~e--------~~~lA~RIm~vR~~ya~e 80 (108)
T d2peqa1 53 DLYLEAMMLE--------NKELVLRILTVRENLAEG 80 (108)
T ss_dssp HHHHHHHHTT--------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--------CHHHHHHHHHHHHHHHHH
T ss_conf 9999999866--------999999999999999999
No 5
>d2peoa1 a.280.1.1 (A:1-115) RuBisCo chaperone RbcX {Anabaena sp. [TaxId: 1167]}
Probab=25.79 E-value=18 Score=14.41 Aligned_cols=15 Identities=27% Similarity=0.470 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 899999999999765
Q gi|254781219|r 42 KLRDKIIELRRKFAK 56 (200)
Q Consensus 42 klrdkiielrrkfak 56 (200)
.|--.|++.|..+|+
T Consensus 65 ~lA~RIm~vR~~yae 79 (115)
T d2peoa1 65 DLALRIMTVREHIAE 79 (115)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999999
No 6
>d2hxja1 a.136.1.1 (A:3-118) Hypothetical protein NMB1681 {Neisseria meningitidis [TaxId: 487]}
Probab=23.51 E-value=3.7 Score=19.21 Aligned_cols=97 Identities=20% Similarity=0.322 Sum_probs=55.4
Q ss_pred HHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH--HHHH-HHHHHHHHCCHHCCC
Q ss_conf 6540643698728995103677999999997535777776412157998763688899--9999-999985301010364
Q gi|254781219|r 55 AKENGLKTVTEVCPKPKDITYSLSHFIEGLIESERSKITEKFKPLAVAKVVSDELLHD--KLNK-ILKKSVRNYSRDSGH 131 (200)
Q Consensus 55 akenglktvtevcpkpkdityslshfieglieserskitekfkplavakvvsdellhd--klnk-ilkksvrnysrdsgh 131 (200)
|-.+++++....-+|-++|.+-+.+|.+-.. +--.||||++. +.+.|+-+ .+.+ -|+..+|.|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~------~~g~~kPLkIG--I~~DL~a~l~~~sk~~Lr~ALr~yt~---- 71 (116)
T d2hxja1 4 ALGAALKSAVQTMSKKKQTEMIADHIYGKYD------VFKRFKPLALG--IDQDLIAALPQYDAALIARVLANHCR---- 71 (116)
T ss_dssp HHHHHHHHHHHTTSHHHHHHHHHHHHHHHCH------HHHTTCCBCTT--HHHHHHHHCTTSCHHHHHHHHHHHHH----
T ss_pred CCCCCCCCHHHCHHHHHHHHHHHHHHHHHCC------CCCCCCCCCCC--HHHHHHHHHHHCCHHHHHHHHHHHHC----
T ss_conf 3111001333320047679999999998574------00375672145--89999988762699999999999988----
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH---HCCCHHHHHCCHHHHHHHH
Q ss_conf 32245666578999999999999985---2088154203048999887
Q gi|254781219|r 132 LNRDVIFHSRYALIRYLEDFYKEIKH---TFGNPADALSPHISELADE 176 (200)
Q Consensus 132 lnrdvifhsryaliryledfykeikh---tfgnpadalsphiselade 176 (200)
-.|||.-. ++-.. .-|+|+..+++.-.+.|-+
T Consensus 72 ------------s~rYL~a~-~~ga~R~DL~G~p~g~Vt~ee~~~A~~ 106 (116)
T d2hxja1 72 ------------RPRYLKAL-ARGGKRFDLNNRFKGEVTPEEQAIAQN 106 (116)
T ss_dssp ------------SHHHHHHH-HHCCEEECTTSCEEEECCHHHHHHHHH
T ss_pred ------------CHHHHHHH-HHCCEEECCCCCCCCCCCHHHHHHHHH
T ss_conf ------------89999999-856825889998878379999999998
No 7
>d2py8a1 a.280.1.1 (A:2-121) RuBisCo chaperone RbcX {Synechocystis sp., strain PCC 6803 [TaxId: 1143]}
Probab=20.54 E-value=23 Score=13.73 Aligned_cols=28 Identities=18% Similarity=0.383 Sum_probs=18.8
Q ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999886418011113678878999999999997654
Q gi|254781219|r 22 DKWCEALYSPESYSNTYREQKLRDKIIELRRKFAKE 57 (200)
Q Consensus 22 dkwcealyspesysntyreqklrdkiielrrkfake 57 (200)
|.||++|..- + +.|--.|++.|..+|.|
T Consensus 53 d~fl~~L~~e-~-------~~lAlRIm~vRe~lAee 80 (120)
T d2py8a1 53 ETFLTELLDE-N-------KELVLRILAVREDIAES 80 (120)
T ss_dssp HHHHHHHHTT-C-------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-C-------HHHHHHHHHHHHHHHHH
T ss_conf 9999999866-9-------99999999999999999
No 8
>d2p4ka1 a.2.11.1 (A:1-83) Mn superoxide dismutase (MnSOD) {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.70 E-value=12 Score=15.65 Aligned_cols=15 Identities=20% Similarity=0.543 Sum_probs=5.8
Q ss_pred HHHHHCCHHCCCCCHHH
Q ss_conf 98530101036432245
Q gi|254781219|r 120 KSVRNYSRDSGHLNRDV 136 (200)
Q Consensus 120 ksvrnysrdsghlnrdv 136 (200)
+.+||. .+||.|-..
T Consensus 62 ~~i~nN--~gg~~NH~~ 76 (83)
T d2p4ka1 62 PALKFN--GGGHINHSI 76 (83)
T ss_dssp HHHHHH--HHHHHHHHH
T ss_pred CCCCCC--CCHHHHHHH
T ss_conf 332305--236865999
No 9
>d1p7ga1 a.2.11.1 (A:12-103) Fe superoxide dismutase (FeSOD) {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=19.34 E-value=12 Score=15.56 Aligned_cols=15 Identities=40% Similarity=0.541 Sum_probs=0.0
Q ss_pred HHHCCHHHHHHHHHH
Q ss_conf 420304899988752
Q gi|254781219|r 164 DALSPHISELADEIH 178 (200)
Q Consensus 164 dalsphiseladeih 178 (200)
|||.|+||+-.-++|
T Consensus 17 ~aLeP~is~eTm~~H 31 (92)
T d1p7ga1 17 NALEPYISAEIMQLH 31 (92)
T ss_dssp TTTTTTSCHHHHHHH
T ss_pred CCCCCCCCHHHHHHH
T ss_conf 756330799999888
No 10
>d1jr9a1 a.2.11.1 (A:2-91) Mn superoxide dismutase (MnSOD) {Bacillus halodenitrificans [TaxId: 1482]}
Probab=19.11 E-value=12 Score=15.66 Aligned_cols=15 Identities=47% Similarity=0.667 Sum_probs=0.0
Q ss_pred HHHCCHHHHHHHHHH
Q ss_conf 420304899988752
Q gi|254781219|r 164 DALSPHISELADEIH 178 (200)
Q Consensus 164 dalsphiseladeih 178 (200)
|||.|+||+-.-++|
T Consensus 12 ~aLeP~is~~t~~~H 26 (90)
T d1jr9a1 12 DALEPTIDKETMNIH 26 (90)
T ss_dssp STTTTTSCHHHHHHH
T ss_pred CCCCCCCCHHHHHHH
T ss_conf 625220599999988
Done!