RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254781221|ref|YP_003065634.1| hypothetical protein
CLIBASIA_05640 [Candidatus Liberibacter asiaticus str. psy62]
         (68 letters)



>1sfe_A ADA O6-methylguanine-DNA methyltransferase; enzyme,
          nucleic acid binding protein, DNA repair protein,
          DNA-binding protein; 2.10A {Escherichia coli B}
          (A:1-88)
          Length = 88

 Score = 24.3 bits (53), Expect = 5.8
 Identities = 6/23 (26%), Positives = 11/23 (47%)

Query: 5  KVLIASTLLSLCGCGLADEPKKL 27
          + L+A +   +C   L D+   L
Sbjct: 26 RCLVAESERGICAILLGDDDATL 48


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.315    0.131    0.371 

Gapped
Lambda     K      H
   0.267   0.0598    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 447,053
Number of extensions: 14510
Number of successful extensions: 37
Number of sequences better than 10.0: 1
Number of HSP's gapped: 37
Number of HSP's successfully gapped: 5
Length of query: 68
Length of database: 4,956,049
Length adjustment: 35
Effective length of query: 33
Effective length of database: 3,772,874
Effective search space: 124504842
Effective search space used: 124504842
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 50 (23.3 bits)