HHsearch alignment for GI: 254781223 and conserved domain: cd03358
>cd03358 LbH_WxcM_N_like WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain. WcxM is thought to be bifunctional, catalyzing both the isomerization and transacetylation reactions of keto-hexoses. It contains an N-terminal LbH domain responsible for the transacetylation function and a C-terminal isomerase domain. The LbH domain contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), typical of enzymes with acyltransferase activity.
Probab=99.69 E-value=7.1e-17 Score=86.89 Aligned_cols=104 Identities=14% Similarity=0.183 Sum_probs=84.3
Q ss_pred CCCCEEECCCEEECCCCEECCCCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 96876988970992883997981545754323112222222100113552022111122211011222221101111111
Q gi|254781223|r 1 MYDNAVVRDCATVIDDARVSGNASVSRFAQVKSNAEVSDNTYVRDNAKVGGYAKVSGNASVGGNAIVRDTAEVGGDAFVI 80 (110)
Q Consensus 1 i~~n~~I~~~a~I~~~~~I~~n~~I~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~~~~~~~i~~~~~i~ 80 (110)
T Consensus 1 IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~Ig~~~~~~~~~~~~~~--~-~~~~~~~~v~Ig~~v~IG 77 (119)
T cd03358 1 IGDNCIIGTNVFIENDVKIGDNVKIQSNVSIYEGVTIEDDVFIGPNVVFTNDLYPRSK--I-YRKWELKGTTVKRGASIG 77 (119)
T ss_pred CCCCCEECCCCEECCCCEECCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCC--C-CCCCCCCCCEECCCEEEC
T ss_conf 9899899999899999999999699998636789998437797788633044466764--3-467632483987883848
Q ss_pred CCCCCCCCEEECCCEEECCCCEECCCE
Q ss_conf 124322013974984998888996980
Q gi|254781223|r 81 GFTVISGNARVRGNAVVGGDTVVEGDT 107 (110)
Q Consensus 81 ~~~~I~~~~~I~~~~~I~~~~~I~~~~ 107 (110)
T Consensus 78 ~~~~I~~gv~IG~~~~IgagSvV~~dv 104 (119)
T cd03358 78 ANATILPGVTIGEYALVGAGAVVTKDV 104 (119)
T ss_pred CCCEEECCEEECCCCEECCCCEECCCC
T ss_conf 874778994989998997799890365