HHsearch alignment for GI: 254781223 and conserved domain: cd04650
>cd04650 LbH_FBP Ferripyochelin Binding Protein (FBP): FBP is an outer membrane protein which plays a role in iron acquisition. It binds iron when it is complexed with pyochelin. It adopts the left-handed parallel beta-helix (LbH) structure, and contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. Acyltransferase activity has not been observed in this group.
Probab=99.83 E-value=9.6e-21 Score=103.02 Aligned_cols=108 Identities=20% Similarity=0.322 Sum_probs=94.2
Q ss_pred CCCCEEECCCEEECCCCEECCCCEECCCCCCCCC---CCCCCCCCEEEEEEEEC----CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9687698897099288399798154575432311---22222221001135520----2211112221101122222110
Q gi|254781223|r 1 MYDNAVVRDCATVIDDARVSGNASVSRFAQVKSN---AEVSDNTYVRDNAKVGG----YAKVSGNASVGGNAIVRDTAEV 73 (110)
Q Consensus 1 i~~n~~I~~~a~I~~~~~I~~n~~I~~~~~i~~~---~~i~~~~~i~~~~~i~~----~~~i~~~~~i~~~~~~~~~~~i 73 (110)
T Consensus 3 I~~~~~I~p~a~i~G~v~IG~~~~I~~~~~Ir~d~~~i~IG~~~~I~~n~~I~~~~~~~~~ig~~v~ig~~~~i~g-~~I 81 (154)
T cd04650 3 ISPKAYVHPTSYVIGDVVIGELTSVWHYAVIRGDNDSIYIGKYSNVQENVSIHTDHGYPTEIGDYVTIGHNAVVHG-AKV 81 (154)
T ss_pred CCCCEEECCCCEEECEEEECCCCEECCCCEEECCCCCEEECCCEEECCCCEEEECCCCCCEECCCCEECCCEEEEC-CEE
T ss_conf 6998799999999760599999999875389558876599993398999889846999868799768899528823-022
Q ss_pred CCCCCCCCCCCCCCCEEECCCEEECCCCEECCCEEE
Q ss_conf 111111112432201397498499888899698097
Q gi|254781223|r 74 GGDAFVIGFTVISGNARVRGNAVVGGDTVVEGDTVL 109 (110)
Q Consensus 74 ~~~~~i~~~~~I~~~~~I~~~~~I~~~~~I~~~~~i 109 (110)
T Consensus 82 g~~v~IG~~a~I~~Gv~IG~~svIgaGsVV~~~~~V 117 (154)
T cd04650 82 GNYVIVGMGAILLNGAKIGDHVIIGAGAVVTPGKEI 117 (154)
T ss_pred CCEEEECCCEEEECCCEECCCCEECCCCEECCCCEE
T ss_conf 013598872299628798999799889888799791