HHsearch alignment for GI: 254781223 and conserved domain: cd04650
>cd04650 LbH_FBP Ferripyochelin Binding Protein (FBP): FBP is an outer membrane protein which plays a role in iron acquisition. It binds iron when it is complexed with pyochelin. It adopts the left-handed parallel beta-helix (LbH) structure, and contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. Acyltransferase activity has not been observed in this group.
Probab=99.50 E-value=5.8e-14 Score=74.73 Aligned_cols=107 Identities=19% Similarity=0.207 Sum_probs=53.9
Q ss_pred CCCCEEECCCEEECCCCEECCCCEECC---CCCCCCCCCCCCCCCEEEE----EEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 968769889709928839979815457---5432311222222210011----355202211112221101122222110
Q gi|254781223|r 1 MYDNAVVRDCATVIDDARVSGNASVSR---FAQVKSNAEVSDNTYVRDN----AKVGGYAKVSGNASVGGNAIVRDTAEV 73 (110)
Q Consensus 1 i~~n~~I~~~a~I~~~~~I~~n~~I~~---~~~i~~~~~i~~~~~i~~~----~~i~~~~~i~~~~~i~~~~~~~~~~~i 73 (110)
T Consensus 9 I~p~a~i~G~v~IG~~~~I~~~~~Ir~d~~~i~IG~~~~I~~n~~I~~~~~~~~~ig~~v~ig~~~~i~g-~~Ig~~v~I 87 (154)
T cd04650 9 VHPTSYVIGDVVIGELTSVWHYAVIRGDNDSIYIGKYSNVQENVSIHTDHGYPTEIGDYVTIGHNAVVHG-AKVGNYVIV 87 (154)
T ss_pred ECCCCEEECEEEECCCCEECCCCEEECCCCCEEECCCEEECCCCEEEECCCCCCEECCCCEECCCEEEEC-CEECCEEEE
T ss_conf 9999999760599999999875389558876599993398999889846999868799768899528823-022013598
Q ss_pred CCCCCCCCCCCCCCCEEECCCEEECCCCEECCCEE
Q ss_conf 11111111243220139749849988889969809
Q gi|254781223|r 74 GGDAFVIGFTVISGNARVRGNAVVGGDTVVEGDTV 108 (110)
Q Consensus 74 ~~~~~i~~~~~I~~~~~I~~~~~I~~~~~I~~~~~ 108 (110)
T Consensus 88 G~~a~I~~Gv~IG~~svIgaGsVV~~~~~Vp~~~l 122 (154)
T cd04650 88 GMGAILLNGAKIGDHVIIGAGAVVTPGKEIPDYSL 122 (154)
T ss_pred CCCEEEECCCEECCCCEECCCCEECCCCEECCCCE
T ss_conf 87229962879899979988988879979199849