HHsearch alignment for GI: 254781223 and conserved domain: cd05635
>cd05635 LbH_unknown Uncharacterized proteins, Left-handed parallel beta-Helix (LbH) domain: Members in this group are uncharacterized bacterial proteins containing a LbH domain with multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=98.97 E-value=1.2e-09 Score=56.71 Aligned_cols=85 Identities=18% Similarity=0.236 Sum_probs=39.0
Q ss_pred EEECCCEEECCCCEECCCCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 69889709928839979815457543231122222221001135520221111222110112222211011111111243
Q gi|254781223|r 5 AVVRDCATVIDDARVSGNASVSRFAQVKSNAEVSDNTYVRDNAKVGGYAKVSGNASVGGNAIVRDTAEVGGDAFVIGFTV 84 (110)
Q Consensus 5 ~~I~~~a~I~~~~~I~~n~~I~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~~~~~~~i~~~~~i~~~~~ 84 (110)
T Consensus 12 V~I~~~~~I~~~~~i~Gp~~IG~~~~I~p~a~Ir~~t~Ig~~~~IG~---------Eik~S~i~~~s~~~H~~Yl-GDS~ 81 (101)
T cd05635 12 IYIGKDAVIEPFAVIEGPVYIGPGSRVKMGARIYGNTTIGPTCKIGG---------EVEDSIIEGYSNKQHDGFL-GHSY 81 (101)
T ss_pred EEECCCCEECCCCEEECCEEECCCCEECCCCEEECCCEECCCCEECC---------EEEEEEEECCCCCCCCCEE-EEEE
T ss_conf 99879999999999976669999999999978638879999977614---------0876188578756877587-6117
Q ss_pred CCCCEEECCCEEECC
Q ss_conf 220139749849988
Q gi|254781223|r 85 ISGNARVRGNAVVGG 99 (110)
Q Consensus 85 I~~~~~I~~~~~I~~ 99 (110)
T Consensus 82 iG~~vNiGAGT~t~N 96 (101)
T cd05635 82 LGSWCNLGAGTNNSD 96 (101)
T ss_pred ECCCCEECCCCEECC
T ss_conf 838757877857805