HHsearch alignment for GI: 254781223 and conserved domain: cd05825

>cd05825 LbH_wcaF_like wcaF-like: This group is composed of the protein product of the E. coli wcaF gene and similar proteins. WcaF is part of the gene cluster responsible for the biosynthesis of the extracellular polysaccharide colanic acid. The wcaF protein is predicted to contain a left-handed parallel beta-helix (LbH) domain encoded by imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. Many are trimeric in their active forms.
Probab=99.28  E-value=5.6e-12  Score=66.45  Aligned_cols=88  Identities=14%  Similarity=0.189  Sum_probs=53.2

Q ss_pred             CEECCCCEECCCCCC--CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf             399798154575432--311222222210011355202211112221101122222110111111112432201397498
Q gi|254781223|r   17 ARVSGNASVSRFAQV--KSNAEVSDNTYVRDNAKVGGYAKVSGNASVGGNAIVRDTAEVGGDAFVIGFTVISGNARVRGN   94 (110)
Q Consensus        17 ~~I~~n~~I~~~~~i--~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~~~~~~~i~~~~~i~~~~~I~~~~~I~~~   94 (110)
T Consensus         4 v~IG~~~~Ig~~~~I~~~~~i~IG~~~~i~~~v~I~~~~h~~~~~~---~~~~~~~v~Ig~~v~IG~~~~I~~gv~Ig~~   80 (107)
T cd05825           4 LTIGDNSWIGEGVWIYNLAPVTIGSDACISQGAYLCTGSHDYRSPA---FPLITAPIVIGDGAWVAAEAFVGPGVTIGEG   80 (107)
T ss_pred             EEECCCCEECCCCEEEECCCEEECCCCEECCCCEECCCCCCCCCCC---CCEECCCEEECCCCEECCCCEEECCCEECCC
T ss_conf             7989986899998995388579999739959959707888876766---5316399799388587498789699191899


Q ss_pred             EEECCCCEECCCE
Q ss_conf             4998888996980
Q gi|254781223|r   95 AVVGGDTVVEGDT  107 (110)
Q Consensus        95 ~~I~~~~~I~~~~  107 (110)
T Consensus        81 svVgagSvV~kdv   93 (107)
T cd05825          81 AVVGARSVVVRDL   93 (107)
T ss_pred             CEEECCCEECCCC
T ss_conf             7994898890385