HHsearch results for GI: 254781223 and protein with PDBid: 3c8v_A
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics, joint center for structural genomics, JCSG; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.56 E-value=3.3e-15 Score=79.04 Aligned_cols=105 Identities=20% Similarity=0.193 Sum_probs=54.9
Q ss_pred CCEEECCCEEECCCCEECCCCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC-----CCC
Q ss_conf 876988970992883997981545754323112222222100113552022111122211011222221101-----111
Q gi|254781223|r 3 DNAVVRDCATVIDDARVSGNASVSRFAQVKSNAEVSDNTYVRDNAKVGGYAKVSGNASVGGNAIVRDTAEVG-----GDA 77 (110)
Q Consensus 3 ~n~~I~~~a~I~~~~~I~~n~~I~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~~~~~~~i~-----~~~ 77 (110)
+.+.+.|.|.|.+++.|++++.|.+++.|++++.++.++.+. ++.++.++.+.+++.+....... +..+. ..+
T Consensus 266 ~~a~I~p~A~Ig~~a~IgP~AVI~~~V~IGdnv~Igs~a~I~-~avIGdg~~I~~~avIg~~~~~g-~~~i~h~~~i~g~ 343 (496)
T 3c8v_A 266 ASGHMASGAGSASGASVSGYAVIKGDTVIGENVLVSQRAYLD-NAWMGKGSNAQENCYIINSRLER-NCVTAHGGKIINA 343 (496)
T ss_dssp HC--------CCTTCEECTTSEEESSCEECTTCEECTTCEEE-EEEECTTCEECTTCEEEEEEEEE-SCEECTTCEEESE
T ss_pred EEEECCCCCEECCCCEECCCCEECCCCEECCCCEEECCEEEE-CCEECCCCEECCCCEEECCCCCC-CCEECCCEEEECC
T ss_conf 001238998879998899998976997998998891673780-55999999999998893164988-8337575089642
Q ss_pred CCCCCCCCCCCEEEC----CCEEECCCCEECCCEEE
Q ss_conf 111124322013974----98499888899698097
Q gi|254781223|r 78 FVIGFTVISGNARVR----GNAVVGGDTVVEGDTVL 109 (110)
Q Consensus 78 ~i~~~~~I~~~~~I~----~~~~I~~~~~I~~~~~i 109 (110)
.|++++.++.++.+. .++.||+++.|+.+++|
T Consensus 344 ~IGdn~~IG~ns~I~~g~~g~v~IGdn~~IgA~T~I 379 (496)
T 3c8v_A 344 HLGDMIFTGFNSFLQGSESSPLKIGDGCVVMPHTII 379 (496)
T ss_dssp EEEETCEECTTCEEECCSSSCEEECTTCEECTTCEE
T ss_pred CCCCCCEECCCCEEECCCCCCCEECCCCEECCCCEE
T ss_conf 717873316874786765588489999799999778