HHsearch results for GI: 254781224 and protein with PDBid: 1nfn_A
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=96.00 E-value=0.014 Score=32.71 Aligned_cols=47 Identities=21% Similarity=0.307 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999
Q gi|254781224|r 34 DLADVRTELKQDIANVRTELKADIADVRTELACTKSELKDAINSQTK 80 (103)
Q Consensus 34 di~~LR~Elk~~i~~LR~Elk~di~~LR~El~~~~~~LR~ei~~~~~ 80 (103)
++..+|.++..++..+|..+......++..+...+.++|+.+...+.
T Consensus 96 ~~e~l~~~l~~~~eelr~~l~~~~~el~~~~~~~~eelr~~l~~~~e 142 (191)
T 1nfn_A 96 ELQAAQARLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLR 142 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998877999999999989999998888999