HHsearch alignment for GI: 254781225 and conserved domain: PRK13341

>PRK13341 recombination factor protein RarA/unknown domain fusion protein; Reviewed.

Probab=95.32  E-value=0.016  Score=34.41  Aligned_cols=41  Identities=20%  Similarity=0.178  Sum_probs=15.5

Q ss_pred             CEEEECCCCCCCCCCEEECCCCC--CCCCCCCCCCCHHHHHHHHH
Q ss_conf             43880477688887457517765--58722164689999999997
Q gi|254781225|r  133 QYFVAYNIHPKTKKEYTWTTPPH--RFKVEDTPLLSEEDVEYLFK  175 (789)
Q Consensus       133 ~q~V~~gshp~Tg~~Y~w~~~~~--~~~~~~~P~i~~~~~~~l~~  175 (789)
T Consensus       136 G~i~LIGA--TTENP~F~vn~ALlSR~~vf~L~~L~~~dl~~il~  178 (726)
T PRK13341        136 GTVTLIGA--TTENPYFEVNKALVSRSRLFRLKSLEDEDLHQLLK  178 (726)
T ss_pred             CEEEEEEE--CCCCCCEEECHHHHHHCEEEEECCCCHHHHHHHHH
T ss_conf             83899970--47897436429888323466743899999999999